Experiment: 2M8T

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1.0 mM [U-99% 13C; U-99% 15N] MAJOR PRION PROTEIN, 10 mM sodium acetate, 0.005 w/v sodium azide	95% H2O/5% D2O	10	4.6	AMBIENT atm	299
2	2D 1H-13C HSQC aliphatic	1.0 mM [U-99% 13C; U-99% 15N] MAJOR PRION PROTEIN, 10 mM sodium acetate, 0.005 w/v sodium azide	95% H2O/5% D2O	10	4.6	AMBIENT atm	299
3	2D 1H-13C HSQC aromatic	1.0 mM [U-99% 13C; U-99% 15N] MAJOR PRION PROTEIN, 10 mM sodium acetate, 0.005 w/v sodium azide	95% H2O/5% D2O	10	4.6	AMBIENT atm	299
4	2D 1H-1H NOESY	1.0 mM [U-99% 13C; U-99% 15N] MAJOR PRION PROTEIN, 10 mM sodium acetate, 0.005 w/v sodium azide	95% H2O/5% D2O	10	4.6	AMBIENT atm	299
5	3D HNCA	1.0 mM [U-99% 13C; U-99% 15N] MAJOR PRION PROTEIN, 10 mM sodium acetate, 0.005 w/v sodium azide	95% H2O/5% D2O	10	4.6	AMBIENT atm	299
6	3D H(CCO)NH	1.0 mM [U-99% 13C; U-99% 15N] MAJOR PRION PROTEIN, 10 mM sodium acetate, 0.005 w/v sodium azide	95% H2O/5% D2O	10	4.6	AMBIENT atm	299
7	3D C(CO)NH	1.0 mM [U-99% 13C; U-99% 15N] MAJOR PRION PROTEIN, 10 mM sodium acetate, 0.005 w/v sodium azide	95% H2O/5% D2O	10	4.6	AMBIENT atm	299
8	3D HCCH	1.0 mM [U-99% 13C; U-99% 15N] MAJOR PRION PROTEIN, 10 mM sodium acetate, 0.005 w/v sodium azide	95% H2O/5% D2O	10	4.6	AMBIENT atm	299
9	3D 1H-13C NOESY aliphatic	1.0 mM [U-99% 13C; U-99% 15N] MAJOR PRION PROTEIN, 10 mM sodium acetate, 0.005 w/v sodium azide	95% H2O/5% D2O	10	4.6	AMBIENT atm	299
10	3D 1H-13C NOESY aromatic	1.0 mM [U-99% 13C; U-99% 15N] MAJOR PRION PROTEIN, 10 mM sodium acetate, 0.005 w/v sodium azide	95% H2O/5% D2O	10	4.6	AMBIENT atm	299
11	2D 1H-13C HSQC aliphatic	1.0 mM [U-5% 13C; U-99% 15N] MAJOR PRION PROTEIN, 10 mM sodium acetate, 0.005 w/v sodium azide	95% H2O/5% D2O	10	4.6	AMBIENT atm	299
12	3D HNCACB	1.0 mM [U-99% 13C; U-99% 15N] MAJOR PRION PROTEIN, 10 mM sodium acetate, 0.005 w/v sodium azide	95% H2O/5% D2O	10	4.6	AMBIENT atm	299
13	3D CBCA(CO)NH	1.0 mM [U-99% 13C; U-99% 15N] MAJOR PRION PROTEIN, 10 mM sodium acetate, 0.005 w/v sodium azide	95% H2O/5% D2O	10	4.6	AMBIENT atm	299
14	3D HNCO	1.0 mM [U-99% 13C; U-99% 15N] MAJOR PRION PROTEIN, 10 mM sodium acetate, 0.005 w/v sodium azide	95% H2O/5% D2O	10	4.6	AMBIENT atm	299
15	3D 1H-15N NOESY	1.0 mM [U-99% 13C; U-99% 15N] MAJOR PRION PROTEIN, 10 mM sodium acetate, 0.005 w/v sodium azide	95% H2O/5% D2O	10	4.6	AMBIENT atm	299

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	INOVA	500
2	Bruker	AVANCE	600
3	Bruker	AVANCE	800
4	Varian	INOVA	900

NMR Refinement
Method	Details	Software
simulated annealing, molecular dynamics, MOLECULAR DYNAMICS		VNMR

NMR Ensemble Information
Conformer Selection Criteria	structures with the least restraint violations
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (fewest violations)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	VNMR		Varian
2	processing	PROSA		Guntert
3	geometry optimization	TALOS		Cornilescu, Delaglio and Bax
4	structure solution	CYANA		Guntert, Mumenthaler and Wuthrich
5	geometry optimization	CNS		Brunger, Adams, Clore, Gros, Nilges and Read
6	data analysis	MOLMOL		Koradi, Billeter and Wuthrich
7	collection	TopSpin		Bruker Biospin
8	refinement	CYANA		Guntert, Mumenthaler and Wuthrich
9	refinement	CNS		Brunger, Adams, Clore, Gros, Nilges and Read

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.