SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-1H COSY | 1.3 mM AhPDF1 | 90% H2O/10% D2O | 0 | 4.5 | ambient | 298 | |
| 2 | 2D 1H-1H TOCSY | 1.3 mM AhPDF1 | 90% H2O/10% D2O | 0 | 4.5 | ambient | 298 | |
| 3 | 2D 1H-1H NOESY | 1.3 mM AhPDF1 | 90% H2O/10% D2O | 0 | 4.5 | ambient | 298 | |
| 4 | 2D 1H-15N HSQC | 1.3 mM AhPDF1 | 90% H2O/10% D2O | 0 | 4.5 | ambient | 298 | |
| 5 | 2D 1H-13C HSQC | 1.3 mM AhPDF1 | 90% H2O/10% D2O | 0 | 4.5 | ambient | 298 | |
| 6 | 2D 1H-1H TOCSY | 1.3 mM AhPDF1 | 100% D2O | 0 | 4.5 | ambient | 298 | |
| 7 | 2D 1H-1H NOESY | 1.3 mM AhPDF1 | 100% D2O | 0 | 4.5 | ambient | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing, torsion angle dynamics | CCPNMR | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the least restraint violations |
| Conformers Calculated Total Number | 500 |
| Conformers Submitted Total Number | 10 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | chemical shift assignment | CCPNMR | 2.2.2 | CCPN |
| 2 | peak picking | CCPNMR | 2.2.2 | CCPN |
| 3 | processing | NMRPipe | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax | |
| 4 | structure solution | ARIA | 2.3 | Linge, O'Donoghue and Nilges |
| 5 | refinement | ARIA | 2.3 | Linge, O'Donoghue and Nilges |
