2M52

NMR Structure of the third RNA Recognition Motif (RRM) of U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1.2 mM [U-98% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 100 mM sodium chloride, 5 mM sodium azide, 8 mM DTT90% H2O/10% D2O0.12986.0ambient298
24D-HACANH-APSY1.2 mM [U-98% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 100 mM sodium chloride, 5 mM sodium azide, 8 mM DTT90% H2O/10% D2O0.12986.0ambient298
35D-CBCACONH-APSY1.2 mM [U-98% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 100 mM sodium chloride, 5 mM sodium azide, 8 mM DTT90% H2O/10% D2O0.12986.0ambient298
45D-HACACONH-APSY1.2 mM [U-98% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 100 mM sodium chloride, 5 mM sodium azide, 8 mM DTT90% H2O/10% D2O0.12986.0ambient298
53D 1H-13C NOESY aliphatic1.2 mM [U-98% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 100 mM sodium chloride, 5 mM sodium azide, 8 mM DTT90% H2O/10% D2O0.12986.0ambient298
63D 1H-13C NOESY aliphatic1.2 mM [U-98% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 100 mM sodium chloride, 5 mM sodium azide, 8 mM DTT90% H2O/10% D2O0.12986.0ambient298
73D 1H-13C NOESY aromatic1.2 mM [U-98% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 100 mM sodium chloride, 5 mM sodium azide, 8 mM DTT90% H2O/10% D2O0.12986.0ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2BrukerAVANCE800
NMR Refinement
MethodDetailsSoftware
simulated annealingCYANA
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number80
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionCYANAG ntert P.
2refinementOPALLuginbuhl, Guntert, Billeter and Wuthrich
3collectionTopSpin3.1Bruker Biospin
4processingTopSpin3.1Bruker Biospin
5chemical shift assignmentCARAKeller and Wuthrich
6data analysisCARAKeller and Wuthrich
7chemical shift assignmentj-UNIOHerrmann, Guntert and Wuthrich
8peak pickingj-UNIOHerrmann, Guntert and Wuthrich
9structure solutionj-UNIOHerrmann, Guntert and Wuthrich