2LVZ

Solution structure of a Eosinophil Cationic Protein-trisaccharide heparin mimetic complex


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D 1H-13C NOESY aliphatic0.5 mM [U-13C; U-15N] Eosinophil Cationic Protein, 0.5 mM Heparin (3-MER), 100 mM potassium phosphate, 300 mM potassium chloride90% H2O/10% D2O0.34.0ambient298
23D 1H-15N NOESY0.5 mM [U-13C; U-15N] Eosinophil Cationic Protein, 0.5 mM Heparin (3-MER), 100 mM potassium phosphate, 300 mM potassium chloride90% H2O/10% D2O0.34.0ambient298
32D 1H-15N HSQC0.5 mM [U-13C; U-15N] Eosinophil Cationic Protein, 0.5 mM Heparin (3-MER), 100 mM potassium phosphate, 300 mM potassium chloride90% H2O/10% D2O0.34.0ambient298
42D 1H-1H NOESY0.5 mM [U-13C; U-15N] Eosinophil Cationic Protein, 0.5 mM Heparin (3-MER), 100 mM potassium phosphate, 300 mM potassium chloride90% H2O/10% D2O0.34.0ambient298
53D CBCA(CO)NH0.5 mM [U-13C; U-15N] Eosinophil Cationic Protein, 0.5 mM Heparin (3-MER), 100 mM potassium phosphate, 300 mM potassium chloride90% H2O/10% D2O0.34.0ambient298
63D HNCACB0.5 mM [U-13C; U-15N] Eosinophil Cationic Protein, 0.5 mM Heparin (3-MER), 100 mM potassium phosphate, 300 mM potassium chloride90% H2O/10% D2O0.34.0ambient298
73D HNCA0.5 mM [U-13C; U-15N] Eosinophil Cationic Protein, 0.5 mM Heparin (3-MER), 100 mM potassium phosphate, 300 mM potassium chloride90% H2O/10% D2O0.34.0ambient298
83D HN(CO)CA0.5 mM [U-13C; U-15N] Eosinophil Cationic Protein, 0.5 mM Heparin (3-MER), 100 mM potassium phosphate, 300 mM potassium chloride90% H2O/10% D2O0.34.0ambient298
93D HCCH-TOCSY0.5 mM [U-13C; U-15N] Eosinophil Cationic Protein, 0.5 mM Heparin (3-MER), 100 mM potassium phosphate, 300 mM potassium chloride90% H2O/10% D2O0.34.0ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE800
NMR Refinement
MethodDetailsSoftware
molecular dynamicsAmber
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionAmberCase, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollman
2structure solutionCYANAGuntert, Mumenthaler and Wuthrich
3chemical shift assignmentSparkyGoddard
4peak pickingSparkyGoddard
5refinementAmberCase, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollman