2LTE

Solution NMR structure of the specialized acyl carrier protein PA3334 (apo) from Pseudomonas aeruginosa, Northeast Structural Genomics Consortium Target PaT415

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM TRIS, 450 mM sodium chloride, 10 mM DTT, 0.01 mM zinc chloride, 0.01 % sodium azide	95% H2O/5% D2O	250	7.7	ambient	298
2	2D 1H-13C HSQC	1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM TRIS, 450 mM sodium chloride, 10 mM DTT, 0.01 mM zinc chloride, 0.01 % sodium azide	95% H2O/5% D2O	250	7.7	ambient	298
3	3D NUS 1H-15N NOESY	1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM TRIS, 450 mM sodium chloride, 10 mM DTT, 0.01 mM zinc chloride, 0.01 % sodium azide	95% H2O/5% D2O	250	7.7	ambient	298
4	3D NUS 1H-13C NOESY aliphatic	1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM TRIS, 450 mM sodium chloride, 10 mM DTT, 0.01 mM zinc chloride, 0.01 % sodium azide	95% H2O/5% D2O	250	7.7	ambient	298
5	3D 1H-13C NOESY aromatic	1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM TRIS, 450 mM sodium chloride, 10 mM DTT, 0.01 mM zinc chloride, 0.01 % sodium azide	95% H2O/5% D2O	250	7.7	ambient	298
6	4D 1H-13C-13C-1H NOESY	1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM TRIS, 450 mM sodium chloride, 10 mM DTT, 0.01 mM zinc chloride, 0.01 % sodium azide	100% D2O	250	7.7	ambient	298
7	3D HNCACB	1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM TRIS, 450 mM sodium chloride, 10 mM DTT, 0.01 mM zinc chloride, 0.01 % sodium azide	95% H2O/5% D2O	250	7.7	ambient	298
8	3D HNCACB	1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM TRIS, 450 mM sodium chloride, 10 mM DTT, 0.01 mM zinc chloride, 0.01 % sodium azide	95% H2O/5% D2O	250	7.7	ambient	298
9	3D HBHA(CO)NH	1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM TRIS, 450 mM sodium chloride, 10 mM DTT, 0.01 mM zinc chloride, 0.01 % sodium azide	95% H2O/5% D2O	250	7.7	ambient	298
10	3D HNCO	1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM TRIS, 450 mM sodium chloride, 10 mM DTT, 0.01 mM zinc chloride, 0.01 % sodium azide	95% H2O/5% D2O	250	7.7	ambient	298
11	3D HCCH-TOCSY	1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM TRIS, 450 mM sodium chloride, 10 mM DTT, 0.01 mM zinc chloride, 0.01 % sodium azide	95% H2O/5% D2O	250	7.7	ambient	298
12	3D C(CO)NH	1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM TRIS, 450 mM sodium chloride, 10 mM DTT, 0.01 mM zinc chloride, 0.01 % sodium azide	95% H2O/5% D2O	250	7.7	ambient	298
13	3D HCCH-TOCSY	1.0 mM [U-100% 13C; U-100% 15N] protein, 10 mM TRIS, 450 mM sodium chloride, 10 mM DTT, 0.01 mM zinc chloride, 0.01 % sodium azide	100% D2O	250	7.7	ambient	298
14	2D 1H-13C HSQC	0.3 mM [U-100% 15N] 7% 13C from 13C glucose protein, 10 mM TRIS, 450 mM sodium chloride, 10 mM DTT, 0.01 mM zinc chloride, 0.01 % sodium azide	95% H2O/5% D2O	250	7.7	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE III	850
2	Bruker	AVANCE III	600
3	Varian	INOVA	800
4	Varian	INOVA	600
5	Varian	INOVA	500

NMR Refinement
Method	Details	Software
simulated annealing, refinement in explicit water	CYANA-3.0 USED TO ASSIGN NOES AND TO CACULATE STRUCTURES AFTER MANUAL NOE EDITING CALC 100, KEEP 20, STEPS=15000, CNS_SOLVE_1.3 VIA FMCGUI, FMCGUI USED TO CONVERT FROM CYANA TO CNS, AND TO SET UP REFINEMENT PARAMETERS FOR CNS.	CYANA

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	structure solution	CYANA	3.0	Guntert, Mumenthaler and Wuthrich
2	refinement	CNS	1.3	Brunger, Adams, Clore, Gros, Nilges and Read
3	refinement	FMCGUI	2.5 linux	(FMCGUI) Alex Lemak
4	peak picking	Sparky	3.113	Goddard
5	predict dihedral angles	TALOS+	Version 1.2009.0721.18	Shen, Cornilescu, Delaglio and Bax
6	processing	MDDGUI	June2009	Alex Lemak, University of Toronto
7	processing	NMRPipe	NMRPipe-2008	Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
8	refinement	CYANA		Guntert, Mumenthaler and Wuthrich

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.