☰ Navigation Tabs
Solution structure of CHCHD7
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.5-1 mM [U-100% 15N] protein, 50 mM potassium phosphate 90% H2O/10% D2O 50 7.0 ambient 298 2 2D 1H-13C HSQC 0.5-1 mM [U-100% 13C; U-100% 15N] protein, 50 mM potassium phosphate 90% H2O/10% D2O 50 7.0 ambient 298 3 3D HNCO 0.5-1 mM [U-100% 13C; U-100% 15N] protein, 50 mM potassium phosphate 90% H2O/10% D2O 50 7.0 ambient 298 4 3D HNCA 0.5-1 mM [U-100% 13C; U-100% 15N] protein, 50 mM potassium phosphate 90% H2O/10% D2O 50 7.0 ambient 298 5 3D HNCACB 0.5-1 mM [U-100% 13C; U-100% 15N] protein, 50 mM potassium phosphate 90% H2O/10% D2O 50 7.0 ambient 298 6 3D HN(CO)CA 0.5-1 mM [U-100% 13C; U-100% 15N] protein, 50 mM potassium phosphate 90% H2O/10% D2O 50 7.0 ambient 298 7 3D HCCH-TOCSY 0.5-1 mM [U-100% 13C; U-100% 15N] protein, 50 mM potassium phosphate 90% H2O/10% D2O 50 7.0 ambient 298 8 3D HN(CA)CO 0.5-1 mM [U-100% 13C; U-100% 15N] protein, 50 mM potassium phosphate 90% H2O/10% D2O 50 7.0 ambient 298 9 3D CBCA(CO)NH 0.5-1 mM [U-100% 13C; U-100% 15N] protein, 50 mM potassium phosphate 90% H2O/10% D2O 50 7.0 ambient 298 10 2D 1H-1H NOESY 0.5-1 mM [U-100% 15N] protein, 50 mM potassium phosphate 90% H2O/10% D2O 50 7.0 ambient 298 11 3D 1H-15N NOESY 0.5-1 mM [U-100% 15N] protein, 50 mM potassium phosphate 90% H2O/10% D2O 50 7.0 ambient 298 12 3D 1H-13C NOESY aliphatic 0.5-1 mM [U-100% 13C; U-100% 15N] protein, 50 mM potassium phosphate 90% H2O/10% D2O 50 7.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 900 2 Bruker AVANCE 500 3 Bruker AVANCE 700
NMR Refinement Method Details Software molecular dynamics TopSpin
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (fewest violations)
Computation: NMR Software # Classification Version Software Name Author 1 collection TopSpin Bruker Biospin 2 processing TopSpin Bruker Biospin 3 data analysis CARA Keller and Wuthrich 4 data analysis PECAN Eghbalnia, Wang, Bahrami, Assadi, and Markley 5 data analysis TALOS Cornilescu, Delaglio and Bax 6 peak picking ATNOS Herrmann, Guntert and Wuthrich 7 noes assignment CANDID Herrmann, Guntert and Wuthrich 8 structure solution CYANA Guntert, Mumenthaler and Wuthrich 9 data analysis XEASY Bartels et al. 10 refinement Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollm 11 structure validation ProcheckNMR Laskowski and MacArthur 12 structure validation PSVS Bhattacharya and Montelione 13 structure validation WHAT IF Vriend 14 data analysis MOLMOL Koradi, Billeter and Wuthrich