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ShB peptide structure bound to negatively charged lipid-bilayer after Molecular Dynamics refinement
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 13C-13C PARISxy 7 mM DOPC, 3 mM Cardiolipin H2O/Lipid 0.3 4.0 277-283 2 13c-13C PDSD 7 mM DOPC, 3 mM Cardiolipin H2O/Lipid 0.3 4.0 277-283 3 SPECIFIC-NCA 7 mM DOPC, 3 mM Cardiolipin H2O/Lipid 0.3 4.0 277-283 4 SPECIFIC-NCO 7 mM DOPC, 3 mM Cardiolipin H2O/Lipid 0.3 4.0 277-283 5 CHHC 7 mM DOPC, 3 mM Cardiolipin H2O/Lipid 0.3 4.0 277-283 6 NHHC 7 mM DOPC, 3 mM Cardiolipin H2O/Lipid 0.3 4.0 277-283 7 HHC 7 mM DOPC, 3 mM Cardiolipin H2O/Lipid 0.3 4.0 277-283
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 500 2 Bruker AVANCE 700
NMR Refinement Method Details Software simulated annealing, molecular dynamics GROMOS
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 1 Conformers Submitted Total Number 1 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 refinement GROMOS 53a6 van Gunsteren and Berendsen 2 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Rea