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NMR solution structure of C-terminal domain of SARS-CoV main protease in 2.5M urea
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D 1H-15N NOESY 1 mM [U-100% 15N] entity-1, 1 mM [U-100% 13C; U-100% 15N] entity-2 90% H2O/10% D2O 50 7 ambient 298 2 3D 1H-13C NOESY 1 mM [U-100% 15N] entity-1, 1 mM [U-100% 13C; U-100% 15N] entity-2 90% H2O/10% D2O 50 7 ambient 298 3 3D 1H-13C NOESY aromatic 1 mM [U-100% 15N] entity-1, 1 mM [U-100% 13C; U-100% 15N] entity-2 90% H2O/10% D2O 50 7 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 500 2 Bruker AVANCE 800
NMR Refinement Method Details Software simulated annealing Amber
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, Kollm 2 structure solution CYANA Guntert, Mumenthaler and Wuthrich 3 structure solution SANE Duggan, Legge, Dyson & Wright 4 data analysis TALOS Cornilescu, Delaglio and Bax