2LEF
LEF1 HMG DOMAIN (FROM MOUSE), COMPLEXED WITH DNA (15BP), NMR, 12 STRUCTURES
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | CT-HNCA | 10 mM KCL | 6.7 | 1 atm | 303 | |||
2 | CBCA(CO)NH | 10 mM KCL | 6.7 | 1 atm | 303 | |||
3 | HNCACB | 10 mM KCL | 6.7 | 1 atm | 303 | |||
4 | C(CO)NH-TOCSY | 10 mM KCL | 6.7 | 1 atm | 303 | |||
5 | HCCH-COSY | 10 mM KCL | 6.7 | 1 atm | 303 | |||
6 | HCCH-TOCSY | 10 mM KCL | 6.7 | 1 atm | 303 | |||
7 | (15N)3D NOESY-HSQC | 10 mM KCL | 6.7 | 1 atm | 303 | |||
8 | (13C)3D NOESY-HSQC | 10 mM KCL | 6.7 | 1 atm | 303 | |||
9 | (13C/13C)4D HMQC-NOESY-HMQC | 10 mM KCL | 6.7 | 1 atm | 303 | |||
10 | 2D 13C/15N DOUBLE HALF-FILTERED NOESY | 10 mM KCL | 6.7 | 1 atm | 303 | |||
11 | 3D 13C-SELECTED(W1 | 10 mM KCL | 6.7 | 1 atm | 303 | |||
12 | W2) 12C-FILTERED (W3) NOESY | 10 mM KCL | 6.7 | 1 atm | 303 | |||
13 | 2D 1H NOESY | 10 mM KCL | 6.7 | 1 atm | 303 | |||
14 | AROMATIC 13C CT-HSQC | 10 mM KCL | 6.7 | 1 atm | 303 | |||
15 | HNCA-J | 10 mM KCL | 6.7 | 1 atm | 303 | |||
16 | HNHA | 10 mM KCL | 6.7 | 1 atm | 303 | |||
17 | HNHB | 10 mM KCL | 6.7 | 1 atm | 303 | |||
18 | HACAHB-COSY | 10 mM KCL | 6.7 | 1 atm | 303 | |||
19 | HMBC | 10 mM KCL | 6.7 | 1 atm | 303 | |||
20 | 3D LRCC | 10 mM KCL | 6.7 | 1 atm | 303 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AMX500 | 500 |
2 | Bruker | AMX600 | 600 |
3 | Bruker | DMX750 | 750 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
DG IN TORSION SPACE (DIANA) AND DYNAMICAL SIMULATED ANNEALING | REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE | Amber |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | CONSTRAINTS VIOLATION, AMBER ENERGIES |
Conformers Calculated Total Number | 28 |
Conformers Submitted Total Number | 12 |
Representative Model | 3 (n/a) |
Additional NMR Experimental Information | |
---|---|
Details | PRESSURE: 1 ATM SOLVENT SYSTEM: 90%H2O/10%D2O, |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | Amber | PEARLMAN,CASE,CALDWELL,ROSS,CHEATHAM, FERGUSON,SEIBEL,SINGH,WEINER,KOLLMAN | |
2 | structure solution | Felix | ||
3 | structure solution | DIANA | ||
4 | structure solution | Amber |