Solution Structure of the Dimeric Form of a Unliganded Bovine Neurophysin, Minimized Average Structure
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 308 | |
| 2 | 2D 1H-13C HSQC | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 308 | |
| 3 | 3D HNCA | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 308 | |
| 4 | 3D HN(CO)CA | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 308 | |
| 5 | 3D HNCACB | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 308 | |
| 6 | 3D HNHA | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 308 | |
| 7 | 3D HNCO | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 308 | |
| 8 | 3D 1H-15N NOESY | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 308 | |
| 9 | 3D 1H-13C NOESY | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 308 | |
| 10 | 3D HCCH-TOCSY | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 308 | |
| 11 | 2D 1H-15N HSQC | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 10mM 0.15mM | 2.7 | ambient | 314 | |
| 12 | 2D 1H-15N HSQC | 1 mM [U-100% 15N] protein | 90% H2O/10% D2O | 0 | 2.7 | ambient | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 600 |
| 2 | Bruker | AVANCE | 600 |
| 3 | Bruker | AVANCE | 700 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | CNSSOLVE | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the least restraint violations |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 21 |
| Representative Model | 1 (minimized average structure) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | CNSSOLVE | 1.0 | Brunger, Adams, Clore, Gros, Nilges and Read |
| 2 | processing | ARIA | 1.0 | Linge, O'Donoghue and Nilges |
| 3 | processing | NMRPipe | 1.0 | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax |
| 4 | data analysis | TALOS | Cornilescu, Delaglio and Bax | |
| 5 | data analysis | Sparky | Goddard | |
| 6 | data analysis | ProcheckNMR | Laskowski and MacArthur | |














