2L5L

Solution Structure of Thioredoxin from Bacteroides Vulgatus


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
115N HSQC1 mM [U-100% 13C; U-100% 15N] thioredoxin, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 90% H2O, 10% D2O90% H2O/10% D2O506.81 atm298
215N NOESY-HSQC1 mM [U-100% 13C; U-100% 15N] thioredoxin, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 90% H2O, 10% D2O90% H2O/10% D2O506.81 atm298
313C HSQC1 mM [U-100% 13C; U-100% 15N] thioredoxin, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT100% D2O506.81 atm298
4aromatic 13C HSQC1 mM [U-100% 13C; U-100% 15N] thioredoxin, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT100% D2O506.81 atm298
513C NOESY-HSQC1 mM [U-100% 13C; U-100% 15N] thioredoxin, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT100% D2O506.81 atm298
613C aromatic NOESY-HSQC1 mM [U-100% 13C; U-100% 15N] thioredoxin, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT100% D2O506.81 atm298
7HNCO1 mM [U-100% 13C; U-100% 15N] thioredoxin, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 90% H2O, 10% D2O90% H2O/10% D2O506.81 atm298
8HNCACO1 mM [U-100% 13C; U-100% 15N] thioredoxin, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 90% H2O, 10% D2O90% H2O/10% D2O506.81 atm298
9HNCA1 mM [U-100% 13C; U-100% 15N] thioredoxin, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 90% H2O, 10% D2O90% H2O/10% D2O506.81 atm298
10HNCOCA1 mM [U-100% 13C; U-100% 15N] thioredoxin, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 90% H2O, 10% D2O90% H2O/10% D2O506.81 atm298
11HNCACB1 mM [U-100% 13C; U-100% 15N] thioredoxin, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 90% H2O, 10% D2O90% H2O/10% D2O506.81 atm298
12CBCACONH1 mM [U-100% 13C; U-100% 15N] thioredoxin, 20 mM sodium phosphate, 50 mM sodium chloride, 1 mM DTT, 90% H2O, 10% D2O90% H2O/10% D2O506.81 atm298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2BrukerDRX600
NMR Refinement
MethodDetailsSoftware
simulating annealingRefinement in a box of waterCNS
NMR Ensemble Information
Conformer Selection Criteria20 structures for lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCNSBrunger A. T. et.al.
2data analysisCCPN_AnalysisCCPN