2L47

Solution structure of the PlyG catalytic domain


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESY1 mM [U-100% 13C; U-100% 15N] PlyG, 10 mM [U-99% 2H] Bis-Tris, 90% H2O, 10% D2O90% H2O/10% D2O136.0AMBIENT303
23D_13C-separated_NOESY1 mM [U-100% 13C; U-100% 15N] PlyG, 10 mM [U-99% 2H] Bis-Tris, 90% H2O, 10% D2O90% H2O/10% D2O136.0AMBIENT303
33D_13C-separated_NOESY (AROMATIC)1 mM [U-100% 13C; U-100% 15N] PlyG, 10 mM [U-99% 2H] Bis-Tris, 90% H2O, 10% D2O90% H2O/10% D2O136.0AMBIENT303
41 mM [U-100% 13C; U-100% 15N] PlyG, 10 mM [U-99% 2H] Bis-Tris, 90% H2O, 10% D2O90% H2O/10% D2O136.0AMBIENT303
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX600
NMR Refinement
MethodDetailsSoftware
AUTOMATED METHODS WERE USED FOR BACKBONE CHEMICAL SHIFT ASSIGNMENT AND ITERATIVE NOE REFINEMENT. FINAL STRUCTURES WERE OBTAINED BY MOLECULAR DYNAMICS IN EXPLICIT SOLVENTSTRUCTURES ARE BASED ON A TOTAL OF 3503 NOE CONSTRAINTS (634 INTRA, 594 SEQUENTIAL, 750 MEDIUM and 1525 LONG RANGE CONSTRAINTS) AND 216 PHI AND PSI DIHEDRAL ANGLE CONSTRAINTS.Xplor-NIH
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementXplor-NIH2.9.3SCHWIETERS,C.D.,KUSZEWSKI,J.J.,TJANDRA,N.,CLORE,G.M.
2collectionTopSpin2.1Bruker
3processingNMRPipe2007Delagio,F. et al.
4data analysisXEASY1.3Eccles, C., Guntert, P., Billeter, M., Wuthrich, K.
5data analysisGARANT2.1C. Bartels
6structural calculationCYANA2.1Guntert, P.