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Solution structure of alpha-mannosidase binding domain of Atg19
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 25mM sodium phosphate-1, 100mM sodium chloride-2, 2mM DTT-3 90% H2O/10% D2O 7.0 ambient 298 2 3D HNCO 25mM sodium phosphate-1, 100mM sodium chloride-2, 2mM DTT-3 90% H2O/10% D2O 7.0 ambient 298 3 3D HNCA 25mM sodium phosphate-1, 100mM sodium chloride-2, 2mM DTT-3 90% H2O/10% D2O 7.0 ambient 298 4 3D HN(CO)CA 25mM sodium phosphate-1, 100mM sodium chloride-2, 2mM DTT-3 90% H2O/10% D2O 7.0 ambient 298 5 3D CBCA(CO)NH 25mM sodium phosphate-1, 100mM sodium chloride-2, 2mM DTT-3 90% H2O/10% D2O 7.0 ambient 298 6 3D HNCACB 25mM sodium phosphate-1, 100mM sodium chloride-2, 2mM DTT-3 90% H2O/10% D2O 7.0 ambient 298 7 3D HNHA 25mM sodium phosphate-1, 100mM sodium chloride-2, 2mM DTT-3 90% H2O/10% D2O 7.0 ambient 298 8 3D HBHA(CO)NH 25mM sodium phosphate-1, 100mM sodium chloride-2, 2mM DTT-3 90% H2O/10% D2O 7.0 ambient 298 9 2D 1H-13C HSQC 25mM sodium phosphate-1, 100mM sodium chloride-2, 2mM DTT-3 90% H2O/10% D2O 7.0 ambient 298 10 2D 1H-1H TOCSY 25mM sodium phosphate-1, 100mM sodium chloride-2, 2mM DTT-3 90% H2O/10% D2O 7.0 ambient 298 11 3D 1H-13C NOESY 25mM sodium phosphate-1, 100mM sodium chloride-2, 2mM DTT-3 90% H2O/10% D2O 7.0 ambient 298 12 3D 1H-15N NOESY 25mM sodium phosphate-1, 100mM sodium chloride-2, 2mM DTT-3 90% H2O/10% D2O 7.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600 2 Varian INOVA 800
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CYANA Guntert, Mumenthaler and Wuthrich 2 processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 chemical shift assignment Sparky Goddard 4 refinement CYANA Guntert, Mumenthaler and Wuthrich