2KVP
Solution Structure of the R10 Domain of Talin
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 1 mM [U-100% 15N] TALIN-1 | 90% H2O/10% D2O | 50 | 6.5 | AMBIENT | 303 | |
| 2 | 2D 1H-13C HSQC | 1 mM [U-100% 13C; U-100% 15N] TALIN-1 | 90% H2O/10% D2O | 50 | 6.5 | AMBIENT | 303 | |
| 3 | 3D HCCH-TOCSY | 1 mM [U-100% 13C; U-100% 15N] TALIN-1 | 90% H2O/10% D2O | 50 | 6.5 | AMBIENT | 303 | |
| 4 | 3D 1H-15N NOESY | 1 mM [U-100% 15N] TALIN-1 | 90% H2O/10% D2O | 50 | 6.5 | AMBIENT | 303 | |
| 5 | 3D 1H-13C NOESY | 1 mM [U-100% 13C; U-100% 15N] TALIN-1 | 90% H2O/10% D2O | 50 | 6.5 | AMBIENT | 303 | |
| 6 | 3D CBCA(CO)NH | 1 mM [U-100% 13C; U-100% 15N] TALIN-1 | 90% H2O/10% D2O | 50 | 6.5 | AMBIENT | 303 | |
| 7 | 3D HNCACB | 1 mM [U-100% 13C; U-100% 15N] TALIN-1 | 90% H2O/10% D2O | 50 | 6.5 | AMBIENT | 303 | |
| 8 | 3D HN(CO)CA | 1 mM [U-100% 13C; U-100% 15N] TALIN-1 | 90% H2O/10% D2O | 50 | 6.5 | AMBIENT | 303 | |
| 9 | 3D HNCO | 1 mM [U-100% 13C; U-100% 15N] TALIN-1 | 90% H2O/10% D2O | 50 | 6.5 | AMBIENT | 303 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DRX | 600 |
| 2 | Bruker | DRX | 600 |
| 3 | Bruker | DRX | 800 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| SIMULATED ANNEALING, MOLECULAR DYNAMICS, TORSION ANGLE DYNAMICS | FINAL STRUCTURES REFINED IN EXPLICIT WATER BATH AS IMPLEMENTED IN ARIA 1.2/CNS 1.1. 20 LOWEST ENERGY STRUCTURES SELECTED FROM WATER REFINEMENT, CNS, INITIAL STRUCTURES GENERATED WITH CYANA | ARIA |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 100 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | ARIA | 1.2 | LINGE, O'DONOGHUE |
| 2 | structure solution | ARIA | 1.2 | LINGE, O'DONOGHUE |
| 3 | chemical shift assignment | CcpNmr Analysis | 15 | CCPN |
| 4 | peak picking | CcpNmr Analysis | 15 | CCPN |
| 5 | data analysis | CcpNmr Analysis | 15 | CCPN |
| 6 | structure solution | CYANA | 2.1 | Guntert, Mumenthaler and Wuthrich |
| 7 | chemical shift assignment | CYANA | 2.1 | Guntert, Mumenthaler and Wuthrich |
| 8 | collection | TopSpin | 2 | Bruker Biospin |
| 9 | processing | TopSpin | 2 | Bruker Biospin |
