2KTU

Human eRF1 C-domain, "closed" conformer


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.8 mM [U-99% 15N] C_ERF1_HUMAN-4, 50 mM potassium chloride-5, 10 mM potassium phosphate-690% H2O/10% D2O0.087.0ambient298
22D 1H-13C HSQC1 mM [U-99% 13C; U-99% 15N] C_ERF1_HUMAN-10, 50 mM potassium chloride-11, 10 mM potassium phosphate-12100% D2O0.087.0ambient298
33D HNCA0.8 mM [U-99% 13C; U-99% 15N] C_ERF1_HUMAN-7, 50 mM potassium chloride-8, 10 mM potassium phosphate-990% H2O/10% D2O0.087.0ambient298
43D HNCACB0.8 mM [U-99% 13C; U-99% 15N] C_ERF1_HUMAN-7, 50 mM potassium chloride-8, 10 mM potassium phosphate-990% H2O/10% D2O0.087.0ambient298
53D HN(CO)CA0.8 mM [U-99% 13C; U-99% 15N] C_ERF1_HUMAN-7, 50 mM potassium chloride-8, 10 mM potassium phosphate-990% H2O/10% D2O0.087.0ambient298
63D CBCA(CO)NH0.8 mM [U-99% 13C; U-99% 15N] C_ERF1_HUMAN-7, 50 mM potassium chloride-8, 10 mM potassium phosphate-990% H2O/10% D2O0.087.0ambient298
73D HBHA(CO)NH0.8 mM [U-99% 13C; U-99% 15N] C_ERF1_HUMAN-7, 50 mM potassium chloride-8, 10 mM potassium phosphate-990% H2O/10% D2O0.087.0ambient298
83D HNCO0.8 mM [U-99% 13C; U-99% 15N] C_ERF1_HUMAN-7, 50 mM potassium chloride-8, 10 mM potassium phosphate-990% H2O/10% D2O0.087.0ambient298
93D HNHA0.8 mM [U-99% 15N] C_ERF1_HUMAN-4, 50 mM potassium chloride-5, 10 mM potassium phosphate-690% H2O/10% D2O0.087.0ambient298
103D 1H-15N NOESY0.8 mM [U-99% 15N] C_ERF1_HUMAN-4, 50 mM potassium chloride-5, 10 mM potassium phosphate-690% H2O/10% D2O0.087.0ambient298
113D 1H-13C NOESY1 mM [U-99% 13C; U-99% 15N] C_ERF1_HUMAN-10, 50 mM potassium chloride-11, 10 mM potassium phosphate-12100% D2O0.087.0ambient298
123D HCCH-TOCSY1 mM [U-99% 13C; U-99% 15N] C_ERF1_HUMAN-10, 50 mM potassium chloride-11, 10 mM potassium phosphate-12100% D2O0.087.0ambient298
132D DQF-COSY1 mM C_ERF1_HUMAN-1, 50 mM potassium chloride-2, 10 mM potassium phosphate-390% H2O/10% D2O0.087.0ambient298
142D 1H-15N HSQC0.8 mM [U-99% 15N] C_ERF1_HUMAN-13, 50 mM potassium chloride-14, 10 mM potassium phosphate-15, 5 % C12E5/hexanol-1690% H2O/10% D2O0.087.0ambient311
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2VarianINOVA700
3VarianINOVA800
NMR Refinement
MethodDetailsSoftware
simulated annealingVNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number100
Conformers Submitted Total Number24
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVNMRVarian
2chemical shift assignmentSparkyGoddard
3processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4data analysisTALOSCornilescu, Delaglio and Bax
5data analysisAnglesearch2.10Polshakov VI & Feeney J.
6structure solutionCNS 2.1Linge, O'Donoghue and Nilges
7refinementARIABRUNGER, ADAMS, CLORE, DELANO, GROS, GROSSE-KUNSTLEVE, JIANG, KUSZEWSKI, NILGES, PANNU, READ, RICE, SIMONSON, WARREN
8chemical shift assignmentARIALinge, O'Donoghue and Nilges
9structure solutionCNSSOLVEBrunger, Adams, Clore, Gros, Nilges and Read
10collectionTopSpinBruker Biospin