2KS1
Heterodimeric association of Transmembrane domains of ErbB1 and ErbB2 receptors Enabling Kinase Activation
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D 1H-15N HSQC | 1 mM [U-100% 15N] ErbB1TM-1, 1 mM [U-100% 15N] ErbB2TM-2, 12 mM DMPC-3, 48 mM DHPC-4 | 95% H2O/5% D2O | 10 | 4.5 | ambient | 313 | |
2 | 2D 1H-13C HSQC | 1 mM ErbB1TM-9, 1 mM [U-100% 13C; U-100% 15N] ErbB2TM-10, 12 mM [U-2H] DMPC-11, 48 mM [U-2H] DHPC-12 | 95% H2O/5% D2O | 10 | 4.5 | ambient | 313 | |
3 | 3D HNCA | 1 mM ErbB1TM-9, 1 mM [U-100% 13C; U-100% 15N] ErbB2TM-10, 12 mM [U-2H] DMPC-11, 48 mM [U-2H] DHPC-12 | 95% H2O/5% D2O | 10 | 4.5 | ambient | 313 | |
4 | 3D HN(CO)CA | 1 mM ErbB1TM-9, 1 mM [U-100% 13C; U-100% 15N] ErbB2TM-10, 12 mM [U-2H] DMPC-11, 48 mM [U-2H] DHPC-12 | 95% H2O/5% D2O | 10 | 4.5 | ambient | 313 | |
5 | 3D 1H-15N NOESY | 1 mM ErbB1TM-9, 1 mM [U-100% 13C; U-100% 15N] ErbB2TM-10, 12 mM [U-2H] DMPC-11, 48 mM [U-2H] DHPC-12 | 95% H2O/5% D2O | 10 | 4.5 | ambient | 313 | |
6 | 3D 1H-15N TOCSY | 1 mM ErbB1TM-9, 1 mM [U-100% 13C; U-100% 15N] ErbB2TM-10, 12 mM [U-2H] DMPC-11, 48 mM [U-2H] DHPC-12 | 95% H2O/5% D2O | 10 | 4.5 | ambient | 313 | |
7 | 3D HCCH-TOCSY | 1 mM [U-100% 13C; U-100% 15N] ErbB1TM-5, 1 mM ErbB2TM-6, 12 mM [U-2H] DMPC-7, 48 mM [U-2H] DHPC-8 | 100% D2O | 10 | 4.5 | ambient | 313 | |
8 | 3D 1H-13C NOESY | 1 mM [U-100% 13C; U-100% 15N] ErbB1TM-5, 1 mM ErbB2TM-6, 12 mM [U-2H] DMPC-7, 48 mM [U-2H] DHPC-8 | 100% D2O | 10 | 4.5 | ambient | 313 | |
9 | 3d-13Cfilt NOESY | 1 mM [U-100% 13C; U-100% 15N] ErbB1TM-5, 1 mM ErbB2TM-6, 12 mM [U-2H] DMPC-7, 48 mM [U-2H] DHPC-8 | 100% D2O | 10 | 4.5 | ambient | 313 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | Avance | 800 |
2 | Bruker | Avance | 600 |
NMR Refinement | ||
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Method | Details | Software |
torsion angle dynamics | TOPSPIN |
NMR Ensemble Information | |
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Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 12 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | processing | TOPSPIN | 2.1 | Bruker Biospin |
2 | chemical shift assignment | CARA | 1.8.4 | Keller and Wuthrich |
3 | data analysis | CARA | 1.8.4 | Keller and Wuthrich |
4 | peak picking | CARA | 1.8.4 | Keller and Wuthrich |
5 | structure solution | CYANA | Guntert, Mumenthaler and Wuthrich | |
6 | refinement | CYANA | Guntert, Mumenthaler and Wuthrich |