2KNF | pdb_00002knf

Solution structure and functional characterization of human plasminogen kringle 5

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	50 mM sodium phosphate, 11 mM AMCHA, 2.2 mM rK5	90% H2O/10% D2O	0.1		ambient	298
2	2D 1H-1H TOCSY	50 mM sodium phosphate, 11 mM AMCHA, 2.2 mM rK5	90% H2O/10% D2O	0.1		ambient	298
3	2D DQF-COSY	50 mM sodium phosphate, 11 mM AMCHA, 2.2 mM rK5	90% H2O/10% D2O	0.1		ambient	298
4	2D 1H-1H NOESY	50 mM sodium phosphate, 11 mM AMCHA, 2.2 mM rK5	90% H2O/10% D2O	0.1		ambient	298
5	3D HNHA	50 mM sodium phosphate, 11 mM AMCHA, 2.2 mM rK5	90% H2O/10% D2O	0.1		ambient	298
6	3D 1H-15N NOESY	50 mM sodium phosphate, 11 mM AMCHA, 2.2 mM rK5	90% H2O/10% D2O	0.1		ambient	298
7	3D 1H-15N TOCSY	50 mM sodium phosphate, 11 mM AMCHA, 2.2 mM rK5	90% H2O/10% D2O	0.1		ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	DRX	500

NMR Refinement
Method	Details	Software
simulated annealing, molecular dynamics		ARIA

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	20
Representative Model	1 (closest to the average)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	chemical shift assignment	ARIA		Linge, J.P. et al.
2	refinement	ARIA		Linge, J.P. et al.
3	structure solution	ARIA		Linge, J.P. et al.