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Structure of the XPF-single strand DNA complex
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D 1H-13C NOESY 80mM sodium phosphate-1, 2mM sodium chloride-2, 0.005-0.010mM AEBSF protease inhibitor-3 95% H2O/5% D2O 80-100 5.2 ambient 293.8 2 3D 1H-15N NOESY 80mM sodium phosphate-1, 2mM sodium chloride-2, 0.005-0.010mM AEBSF protease inhibitor-3 95% H2O/5% D2O 80-100 5.2 ambient 293.8 3 3D CBCA(CO)NH 80mM sodium phosphate-1, 2mM sodium chloride-2, 0.005-0.010mM AEBSF protease inhibitor-3 95% H2O/5% D2O 80-100 5.2 ambient 293.8 4 2D 1H-15N HSQC 80mM sodium phosphate-1, 2mM sodium chloride-2, 0.005-0.010mM AEBSF protease inhibitor-3 95% H2O/5% D2O 80-100 5.2 ambient 293.8 5 2D 1H-13C HSQC 80mM sodium phosphate-1, 2mM sodium chloride-2, 0.005-0.010mM AEBSF protease inhibitor-3 95% H2O/5% D2O 80-100 5.2 ambient 293.8 6 3D HCCH-TOCSY 80mM sodium phosphate-1, 2mM sodium chloride-2, 0.005-0.010mM AEBSF protease inhibitor-3 95% H2O/5% D2O 80-100 5.2 ambient 293.8 7 3D C(CO)NH 80mM sodium phosphate-1, 2mM sodium chloride-2, 0.005-0.010mM AEBSF protease inhibitor-3 95% H2O/5% D2O 80-100 5.2 ambient 293.8
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 900 2 Bruker DRX 600
NMR Refinement Method Details Software simulated annealing, torsion angle dynamics XwinNMR
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing XwinNMR 3.5 Bruker Biospin 2 structure solution CYANA Herrmann, Guntert and Wuthrich 3 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read