NMR structure of the F0F1 double domain (residues 1-202) of the talin ferm domain
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D 1H-15N HSQC | 0.8 mM [U-100% 15N] F0F1-1, 50 mM sodium chloride-2, 2 mM DTT-3 | 90% H2O/10% D2O | 50 | 6.5 | AMBIENT | 298 | |
| 2 | 3D HCCH-TOCSY | 0.8 mM [U-100% 13C; U-100% 15N] F0F1-4, 50 mM sodium chloride-5, 2 mM DTT-6 | 90% H2O/10% D2O | 50 | 6.5 | AMBIENT | 298 | |
| 3 | 3D CBCA(CO)NH | 0.8 mM [U-100% 13C; U-100% 15N] F0F1-4, 50 mM sodium chloride-5, 2 mM DTT-6 | 90% H2O/10% D2O | 50 | 6.5 | AMBIENT | 298 | |
| 4 | 3D HNCACB | 0.8 mM [U-100% 13C; U-100% 15N] F0F1-4, 50 mM sodium chloride-5, 2 mM DTT-6 | 90% H2O/10% D2O | 50 | 6.5 | AMBIENT | 298 | |
| 5 | 3D 1H-15N NOESY | 0.8 mM [U-100% 15N] F0F1-1, 50 mM sodium chloride-2, 2 mM DTT-3 | 90% H2O/10% D2O | 50 | 6.5 | AMBIENT | 298 | |
| 6 | 3D 1H-13C NOESY | 0.8 mM [U-100% 13C; U-100% 15N] F0F1-4, 50 mM sodium chloride-5, 2 mM DTT-6 | 90% H2O/10% D2O | 50 | 6.5 | AMBIENT | 298 | |
| 7 | 3D HBHA(CO)NH | 0.8 mM [U-100% 13C; U-100% 15N] F0F1-4, 50 mM sodium chloride-5, 2 mM DTT-6 | 90% H2O/10% D2O | 50 | 6.5 | AMBIENT | 298 | |
| 8 | 3D HNCO | 0.8 mM [U-100% 13C; U-100% 15N] F0F1-4, 50 mM sodium chloride-5, 2 mM DTT-6 | 90% H2O/10% D2O | 50 | 6.5 | AMBIENT | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DRX | 800 |
| 2 | Bruker | DRX | 600 |
| 3 | Bruker | DRX | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| SIMULATED ANNEALING, MOLECULAR DYNAMICS, TORSION ANGLE DYNAMICS | FINAL STRUCTURES REFINED IN EXPLICIT WATER BATH AS IMPLEMENTED IN ARIA 1.2/CNS 1.1., 20 LOWEST ENERGY STRUCTURES SELECTED FROM WATER REFINEMENT USING CNS. INITIAL STRUCTURES GENERATED WITH CYANA. | TopSpin |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | structures with the lowest energy |
| Conformers Calculated Total Number | 200 |
| Conformers Submitted Total Number | 20 |
| Representative Model | 1 (lowest energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | collection | TopSpin | 2 | Bruker Biospin |
| 2 | processing | TopSpin | 2 | Bruker Biospin |
| 3 | chemical shift assignment | CcpNmr Analysis | 1.15 | CCPN |
| 4 | data analysis | CcpNmr Analysis | 1.15 | CCPN |
| 5 | peak picking | CcpNmr Analysis | 1.15 | CCPN |
| 6 | structure solution | CYANA | 2 | Guntert, Mumenthaler and Wuthrich |
| 7 | chemical shift assignment | CYANA | 2 | Guntert, Mumenthaler and Wuthrich |
| 8 | geometry optimization | CYANA | 2 | Guntert, Mumenthaler and Wuthrich |
| 9 | structure solution | ARIA | 1.2 | Linge, O'Donoghue and Nilges |
| 10 | refinement | ARIA | 1.2 | Linge, O'Donoghue and Nilges |














