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Structure of the C-terminal non-repetitive domain of the spider dragline silk protein ADF-3
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.2-1mM [U-99% 15N] NR3-5 95% H2O/5% D2O 0.02 6.0 ambient 298 2 2D 1H-13C HSQC 0.5-1.3mM [U-99% 13C; U-99% 15N] NR3-1 95% H2O/5% D2O 0.02 6.0 ambient 298 3 3D HNCO 0.5-1.3mM [U-99% 13C; U-99% 15N] NR3-1 95% H2O/5% D2O 0.02 6.0 ambient 298 4 3D HNCA 0.5-1.3mM [U-99% 13C; U-99% 15N] NR3-1 95% H2O/5% D2O 0.02 6.0 ambient 298 5 3D HNCACB 0.5-1.3mM [U-99% 13C; U-99% 15N] NR3-1 95% H2O/5% D2O 0.02 6.0 ambient 298 6 3D CBCA(CO)NH 0.5-1.3mM [U-99% 13C; U-99% 15N] NR3-1 95% H2O/5% D2O 0.02 6.0 ambient 298 7 3D HN(CO)CA 0.5-1.3mM [U-99% 13C; U-99% 15N] NR3-1 95% H2O/5% D2O 0.02 6.0 ambient 298 8 3D HN(CA)CO 0.5-1.3mM [U-99% 13C; U-99% 15N] NR3-1 95% H2O/5% D2O 0.02 6.0 ambient 298 9 3D HCCH-TOCSY 0.5-1.3mM [U-99% 13C; U-99% 15N] NR3-1 95% H2O/5% D2O 0.02 6.0 ambient 298 10 3D HNHA 0.2-1mM [U-99% 15N] NR3-5 95% H2O/5% D2O 0.02 6.0 ambient 298 11 3D HNHB 0.2-1mM [U-99% 15N] NR3-5 95% H2O/5% D2O 0.02 6.0 ambient 298 12 3D CCH-COSY 0.5-1.3mM [U-99% 13C; U-99% 15N] NR3-1 95% H2O/5% D2O 0.02 6.0 ambient 298 13 3D C(CO)NH 0.5-1.3mM [U-99% 13C; U-99% 15N] NR3-1 95% H2O/5% D2O 0.02 6.0 ambient 298 14 3D 1H-15N NOESY 0.2-1mM [U-99% 15N] NR3-5 95% H2O/5% D2O 0.02 6.0 ambient 298 15 3D 1H-13C NOESY 0.5-1.3mM [U-99% 13C; U-99% 15N] NR3-1 95% H2O/5% D2O 0.02 6.0 ambient 298 16 3D CNH NOESY 0.5-1.3mM [U-99% 13C; U-99% 15N] NR3-1 95% H2O/5% D2O 0.02 6.0 ambient 298 17 3D NNH NOESY 0.2-1mM [U-99% 15N] NR3-5 95% H2O/5% D2O 0.02 6.0 ambient 298 18 3D CCH NOESY 0.5-1.3mM [U-99% 13C; U-99% 15N] NR3-1 95% H2O/5% D2O 0.02 6.0 ambient 298 19 2D 1H-1H NOESY 0.6-1mM NR3-2 95% H2O/5% D2O 0.02 6.0 ambient 298 20 filtered NOESY 1mM [U-99% 13C; U-99% 15N] NR3-3, 1mM NR3-4 95% H2O/5% D2O 0.02 6.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DMX 600 2 Bruker DMX 750 3 Bruker AVANCE 900
NMR Refinement Method Details Software simulated annealing TopSpin
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 50 Conformers Submitted Total Number 21 Representative Model 1 (minimized average)
Computation: NMR Software # Classification Version Software Name Author 1 processing TopSpin 1.3 Bruker Biospin 2 peak picking Sparky 3.11 Goddard 3 chemical shift assignment PASTA 0.1 Kessler, Gemmecker 4 data analysis TALOS 9.4 Cornilescu, Delaglio, Bax 5 structure solution X-PLOR NIH Schwieters, Kuszewski, Tjandra, Clore 6 data analysis ProcheckNMR Laskowski, MacArthur 7 refinement X-PLOR NIH Schwieters, Kuszewski, Tjandra, Clore