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Solution Structure of the Bacterial Toxin Rele from Thermus Thermophilus HB8
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D 1H-15N NOESY 0.4mM [U-100% 13C; U-100% 15N] protein-1, 20mM [U-2H] d-Tris-HCl-2, 100mM sodium chloride-3, 5mM [U-2H] d-DTT-4 90% H2O/10% D2O 120 7.0 ambient 298 2 3D 1H-13C NOESY 0.4mM [U-100% 13C; U-100% 15N] protein-1, 20mM [U-2H] d-Tris-HCl-2, 100mM sodium chloride-3, 5mM [U-2H] d-DTT-4 90% H2O/10% D2O 120 7.0 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 800
NMR Refinement Method Details Software torsion angle dynamics, simulated annealing XwinNMR
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 100 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 collection XwinNMR 3.5 Bruker Biospin 2 processing NMRPipe 20060702 Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax 3 data analysis NMRView 5.0.4 Johnson, One Moon Scientific 4 data analysis KUJIRA 0.9820 Kobayashi, N. 5 collection NMRPipe 20060702 Yokochi, M 6 data analysis NMRPipe 20060702 Yokochi, M 7 chemical shift assignment NMRPipe 20060702 Yokochi, M 8 structure solution CYANA 2.0.17 Guntert, Mumenthaler and Wuthrich 9 collection Sparky Goddard 10 data analysis Sparky Goddard 11 chemical shift assignment Sparky Goddard 12 structure solution Sparky Goddard 13 refinement CYANA 2.0.17 Guntert, Mumenthaler and Wuthrich