2KG6

Solution Structure of the acetyl Actinorhodin Acyl Carrier Protein from Streptomyces coelicolor


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1-2 mM [U-98% 13C; U-98% 15N] Acyl Carrier Protein-1, 20 mM potassium phosphate-2, 1 mM sodium azide-395% H2O/5% D2O5.5ambient298
23D CBCA(CO)NH1-2 mM [U-98% 13C; U-98% 15N] Acyl Carrier Protein-1, 20 mM potassium phosphate-2, 1 mM sodium azide-395% H2O/5% D2O5.5ambient298
33D HNCACB1-2 mM [U-98% 13C; U-98% 15N] Acyl Carrier Protein-1, 20 mM potassium phosphate-2, 1 mM sodium azide-395% H2O/5% D2O5.5ambient298
43D H(CCO)NH1-2 mM [U-98% 13C; U-98% 15N] Acyl Carrier Protein-1, 20 mM potassium phosphate-2, 1 mM sodium azide-395% H2O/5% D2O5.5ambient298
53D C(CO)NH1-2 mM [U-98% 13C; U-98% 15N] Acyl Carrier Protein-1, 20 mM potassium phosphate-2, 1 mM sodium azide-395% H2O/5% D2O5.5ambient298
63D HCCH-TOCSY1-2 mM [U-98% 13C; U-98% 15N] Acyl Carrier Protein-1, 20 mM potassium phosphate-2, 1 mM sodium azide-395% H2O/5% D2O5.5ambient298
73D HNCO1-2 mM [U-98% 13C; U-98% 15N] Acyl Carrier Protein-1, 20 mM potassium phosphate-2, 1 mM sodium azide-395% H2O/5% D2O5.5ambient298
83D HNHA1-2 mM [U-98% 13C; U-98% 15N] Acyl Carrier Protein-1, 20 mM potassium phosphate-2, 1 mM sodium azide-395% H2O/5% D2O5.5ambient298
93D 1H-15N NOESY1-2 mM [U-98% 13C; U-98% 15N] Acyl Carrier Protein-1, 20 mM potassium phosphate-2, 1 mM sodium azide-395% H2O/5% D2O5.5ambient298
103D 1H-13C NOESY1-2 mM [U-98% 13C; U-98% 15N] Acyl Carrier Protein-1, 20 mM potassium phosphate-2, 1 mM sodium azide-395% H2O/5% D2O5.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
NMR Refinement
MethodDetailsSoftware
simulated annealingALL STRUCTURE CALCULATIONS WERE CARRIED OUT USING THE AMBIGUOUS RESTRAINTS FOR ITERATIVE ASSIGNMENT OF NOES (ARIA) PROTOCOL VERSION 1.2. THE 20 BEST STRUCTURES (SORTED ACCORDING TO TOTAL ENERGY) WERE SELECTED FOR WATER REFINEMENT. WATER REFINED STRUCTURES WERE CALCULATED USING THE SLIGHTLY MODIFIED REFINEMENT SCRIPT APPLIED TO THE RECOORD DATABASE. PROCHECK AND WHATCHECK AND QUALITY INDICATORS WERE COMPARED TO THE AVERAGE VALUES FOR THE RECOORD DATABASE OF PROTEIN NMR STRUCTURES.ARIA
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure solutionARIA1.2Linge, O'Donoghue and Nilges
2refinementARIA1.2Linge, O'Donoghue and Nilges
3peak pickingARIA1.2Linge, O'Donoghue and Nilges
4chemical shift assignmentANALYSIS1.0Tim Stevens, Wayne Boucher (CCPN)
5data analysisANALYSIS1.0Tim Stevens, Wayne Boucher (CCPN)
6peak pickingANALYSIS1.0Tim Stevens, Wayne Boucher (CCPN)
7processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax