2KE7

NMR structure of the first SAM domain from AIDA1


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.8 mM [U-98% 13C; U-98% 15N] AIDA1 SAM1-1, 10 % D2O-2, 90 % H2O-3, 150 mM sodium chloride-4, 20 mM sodium phosphate-5, 0.05 % sodium azide-690% H2O/10% D2O0.157.8ambient293
22D 1H-13C HSQC0.8 mM [U-98% 13C; U-98% 15N] AIDA1 SAM1-1, 10 % D2O-2, 90 % H2O-3, 150 mM sodium chloride-4, 20 mM sodium phosphate-5, 0.05 % sodium azide-690% H2O/10% D2O0.157.8ambient293
33D CBCA(CO)NH0.8 mM [U-98% 13C; U-98% 15N] AIDA1 SAM1-1, 10 % D2O-2, 90 % H2O-3, 150 mM sodium chloride-4, 20 mM sodium phosphate-5, 0.05 % sodium azide-690% H2O/10% D2O0.157.8ambient293
43D C(CO)NH0.8 mM [U-98% 13C; U-98% 15N] AIDA1 SAM1-1, 10 % D2O-2, 90 % H2O-3, 150 mM sodium chloride-4, 20 mM sodium phosphate-5, 0.05 % sodium azide-690% H2O/10% D2O0.157.8ambient293
53D HNCO0.8 mM [U-98% 13C; U-98% 15N] AIDA1 SAM1-1, 10 % D2O-2, 90 % H2O-3, 150 mM sodium chloride-4, 20 mM sodium phosphate-5, 0.05 % sodium azide-690% H2O/10% D2O0.157.8ambient293
63D HNCACB0.8 mM [U-98% 13C; U-98% 15N] AIDA1 SAM1-1, 10 % D2O-2, 90 % H2O-3, 150 mM sodium chloride-4, 20 mM sodium phosphate-5, 0.05 % sodium azide-690% H2O/10% D2O0.157.8ambient293
73D H(CCO)NH0.8 mM [U-98% 13C; U-98% 15N] AIDA1 SAM1-1, 10 % D2O-2, 90 % H2O-3, 150 mM sodium chloride-4, 20 mM sodium phosphate-5, 0.05 % sodium azide-690% H2O/10% D2O0.157.8ambient293
83D 1H-15N NOESY0.8 mM [U-98% 13C; U-98% 15N] AIDA1 SAM1-1, 10 % D2O-2, 90 % H2O-3, 150 mM sodium chloride-4, 20 mM sodium phosphate-5, 0.05 % sodium azide-690% H2O/10% D2O0.157.8ambient293
93D 1H-13C NOESY0.8 mM [U-98% 13C; U-98% 15N] AIDA1 SAM1-1, 10 % D2O-2, 90 % H2O-3, 150 mM sodium chloride-4, 20 mM sodium phosphate-5, 0.05 % sodium azide-690% H2O/10% D2O0.157.8ambient293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianNMRS600
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics, simulated annealing5000 steps using CYANA standard torsion angle dynamics, water-refinement using XPLOR-NIH and cartesian dynamics. Specifics: 2000 hot steps at 500 K, 500 cool steps to 100 K final in 100 K incrementsX-PLOR NIH
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number25
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsThis structure was determined using NOE restraints and dihedral angle restraints predicted from chemical shifts
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementX-PLOR NIH2.21Schwieters, C.D. et al.
2peak pickingNMRView5Johnson, B. et al.
3structure solutionCYANA2.1Guntert, P. et al.