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Solution structure of the stem-loop IIId of GBV-B IRES
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 1-1.6 mM RNA 90% H2O/10% D2O 6.8 ambient 298 2 2D DQF-COSY 1-1.6 mM RNA 90% H2O/10% D2O 6.8 ambient 298 3 2D 1H-13C HSQC 1-1.6 mM RNA 90% H2O/10% D2O 6.8 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 750 2 Varian INOVA 600
NMR Refinement Method Details Software distance geometry, molecular dynamics, matrix relaxation VnmrJ
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 10 Conformers Submitted Total Number 12 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment VnmrJ Varian 2 refinement X-PLOR 3.1 Brunger