2KD8 | pdb_00002kd8

Solution structure of the stem-loop IIId of GBV-B IRES

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D NOESY	1-1.6 mM RNA	90% H2O/10% D2O		6.8	ambient	298
2	2D DQF-COSY	1-1.6 mM RNA	90% H2O/10% D2O		6.8	ambient	298
3	2D 1H-13C HSQC	1-1.6 mM RNA	90% H2O/10% D2O		6.8	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	INOVA	750
2	Varian	INOVA	600

NMR Refinement
Method	Details	Software
distance geometry, molecular dynamics, matrix relaxation		VnmrJ

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	10
Conformers Submitted Total Number	12
Representative Model	1 (closest to the average)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	chemical shift assignment	VnmrJ		Varian
2	refinement	X-PLOR	3.1	Brunger