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Solution structure of PLAA family ubiquitin binding domain (PFUC) trans isomer in complex with ubiquitin
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.2 mM [U-100% 15N] Ubiquitin, 90% H2O, 10% D2O 90% H2O/10% D2O 50mM NaCl 6.5 ambient 298 2 2D 1H-15N HSQC 0.2 mM [U-100% 15N] PFUC_trans, 90% H2O, 10% D2O 90% H2O/10% D2O 50mM NaCl 6.5 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian UNITY 600
NMR Refinement Method Details Software simulated annealing The structures were calculated with HADDOCK by NMR restraint-guided docking CNS
NMR Ensemble Information Conformer Selection Criteria 10 structures for lowest energy Conformers Calculated Total Number 200 Conformers Submitted Total Number 10 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 refinement CNS Brunger, Adams, Clore, Gros, Nilges and Read