2K86

Solution Structure of FOXO3a Forkhead domain


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC20 mM sodium phosphate, 50 mM potassium chloride, 2 mM DTT, 0.5 mM sodium azide90% H2O/10% D2O0.086.5ambient298
23D HNCACB20 mM sodium phosphate, 50 mM potassium chloride, 2 mM DTT, 0.5 mM sodium azide90% H2O/10% D2O0.086.5ambient298
33D CBCA(CO)NH20 mM sodium phosphate, 50 mM potassium chloride, 2 mM DTT, 0.5 mM sodium azide90% H2O/10% D2O0.086.5ambient298
43D HNCO20 mM sodium phosphate, 50 mM potassium chloride, 2 mM DTT, 0.5 mM sodium azide90% H2O/10% D2O0.086.5ambient298
53D C(CO)NH20 mM sodium phosphate, 50 mM potassium chloride, 2 mM DTT, 0.5 mM sodium azide90% H2O/10% D2O0.086.5ambient298
63D H(CCO)NH20 mM sodium phosphate, 50 mM potassium chloride, 2 mM DTT, 0.5 mM sodium azide90% H2O/10% D2O0.086.5ambient298
73D 1H-15N NOESY20 mM sodium phosphate, 50 mM potassium chloride, 2 mM DTT, 0.5 mM sodium azide90% H2O/10% D2O0.086.5ambient298
83D 1H-13C NOESY20 mM sodium phosphate, 50 mM potassium chloride, 2 mM DTT, 0.5 mM sodium azide100% D2O0.086.5ambient298
92D 1H-13C HSQC20 mM sodium phosphate, 50 mM potassium chloride, 2 mM DTT, 0.5 mM sodium azide100% D2O0.086.5ambient298
103D HCCH-TOCSY20 mM sodium phosphate, 50 mM potassium chloride, 2 mM DTT, 0.5 mM sodium azide100% D2O0.086.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE800
2VarianINOVA600
3VarianINOVA500
NMR Refinement
MethodDetailsSoftware
simulated annealingwater refinement 'Aart J. Nederveen, Jurgen F. Doreleijers, Wim Vranken, Zachary Miller, Chris A.E.M. Spronk, Sander B. Nabuurs, Peter Guentert, Miron Livny, John L. Markley, Michael Nilges, Eldon L. Ulrich, Robert Kaptein and Alexandre M.J.J. Bonvin (2005). RECOORD: a REcalculated COORdinates Database of 500+ proteins from the PDB using restraints from the BioMagResBank. Proteins 59, 662-672.'CNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCNSBrunger, A.T. et al.
2data analysisCYANAGuntert, P. et al.
3processingNMRPipeDelaglio, F. et al.
4chemical shift assignmentXEASYBartels, C. et al.
5peak pickingXEASYBartels, C. et al.
6data analysisTALOSCornilescu, G. et al.
7data analysisProcheckNMRLaskowski, R. et al.
8data analysisNMRViewJohnson, B. et al.