2K5U | pdb_00002k5u

Solution structure of myirstoylated yeast ARF1 protein, GDP-bound

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	3D CBCA(CO)NH	0.8 mM [U-98% 13C; U-98% 15N] myr-yARF1.GDP	95% H2O/5% D2O	0.1	7	ambient	298
2	3D HNCA	0.8 mM [U-98% 13C; U-98% 15N] myr-yARF1.GDP	95% H2O/5% D2O	0.1	7	ambient	298
3	3D HNCO	0.8 mM [U-13C; U-15N; U-2H] myr-yARF1.GDP	95% H2O/5% D2O	0.1	7	ambient	298
4	3D HNCACB	0.8 mM [U-13C; U-15N; U-2H] myr-yARF1.GDP	95% H2O/5% D2O	0.1	7	ambient	298
5	3D HN(CO)CA	0.8 mM [U-13C; U-15N; U-2H] myr-yARF1.GDP	95% H2O/5% D2O	0.1	7	ambient	298
6	3D HN(COCA)CB	0.8 mM [U-13C; U-15N; U-2H] myr-yARF1.GDP	95% H2O/5% D2O	0.1	7	ambient	298
7	3D 1H-15N NOESY	0.8 mM [U-13C; U-15N; U-2H] myr-yARF1.GDP	95% H2O/5% D2O	0.1	7	ambient	298
8	3D 1H-13C NOESY	0.8 mM [U-100% 13C; U-100% 15N; 80% 2H] myr-yARF1.GDP	95% H2O/5% D2O	0.1	7	ambient	298
9	3D 13C-filtered-NOESY-13C-edited NOESY	0.8 mM [U-100% 13C; U-100% 15N; 80% 2H] myr-yARF1.GDP	95% H2O/5% D2O	0.1	7	ambient	298
10	3D doubly-enhanced 13C exicted C-CmHm-TOCSY	0.8 mM [U-100% 13C; U-100% 15N; 80% 2H] myr-yARF1.GDP	95% H2O/5% D2O	0.1	7	ambient	298
11	2D HSQC-TROSY	0.8 mM [U-13C; U-15N; U-2H] myr-yARF1.GDP	95% H2O/5% D2O	0.1	7	ambient	298
12	2D HSQC-TROSY	0.8 mM [U-13C; U-15N; U-2H] myr-yARF1.GDP	95% H2O/5% D2O	0.1	7	ambient	298
13	3D HNCO-JNCO	0.8 mM [U-13C; U-15N; U-2H] myr-yARF1.GDP	95% H2O/5% D2O	0.1	7	ambient	298
14	3D HNCO-JNCO	0.8 mM [U-13C; U-15N; U-2H] myr-yARF1.GDP	95% H2O/5% D2O	0.1	7	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Varian	INOVA	600
2	Varian	INOVA	800

NMR Refinement
Method	Details	Software
simulated annealing		VNMR

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	16
Representative Model	1 (closest to the average)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	collection	VNMR		Varian
2	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
3	chemical shift assignment	Sparky		Goddard
4	structure solution	CNS		Brunger, Adams, Clore, Gros, Nilges and Read
5	refinement	CNS		Brunger, Adams, Clore, Gros, Nilges and Read