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The Solution Structure of the Monomeric Copper, Zinc Superoxide Dismutase from Salmonella enterica
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-13C HSQC 1.8 mM [U-95% 13C; U-95% 15N] sodc2 90% H2O/10% D2O 0.02 6.0 1 atm 298 2 2D 1H-1H NOESY 1.6 mM [U-98% 15N] sodc2 90% H2O/10% D2O 0.02 6.0 1 atm 298 3 3D CBCA(CO)NH 1.8 mM [U-95% 13C; U-95% 15N] sodc2 90% H2O/10% D2O 0.02 6.0 1 atm 298 4 3D HNCO 1.8 mM [U-95% 13C; U-95% 15N] sodc2 90% H2O/10% D2O 0.02 6.0 1 atm 298 5 3D HNCA 1.8 mM [U-95% 13C; U-95% 15N] sodc2 90% H2O/10% D2O 0.02 6.0 1 atm 298 6 3D HNCACB 1.8 mM [U-95% 13C; U-95% 15N] sodc2 90% H2O/10% D2O 0.02 6.0 1 atm 298 7 3D HN(CO)CA 1.8 mM [U-95% 13C; U-95% 15N] sodc2 90% H2O/10% D2O 0.02 6.0 1 atm 298 8 3D HBHA(CO)NH 1.8 mM [U-95% 13C; U-95% 15N] sodc2 90% H2O/10% D2O 0.02 6.0 1 atm 298 9 3D HCCH-TOCSY 1.8 mM [U-95% 13C; U-95% 15N] sodc2 90% H2O/10% D2O 0.02 6.0 1 atm 298 10 3D 1H-15N NOESY 1.8 mM [U-95% 13C; U-95% 15N] sodc2 90% H2O/10% D2O 0.02 6.0 1 atm 298 11 3D 1H-13C NOESY 1.8 mM [U-95% 13C; U-95% 15N] sodc2 90% H2O/10% D2O 0.02 6.0 1 atm 298 12 3D HNHA 1.6 mM [U-98% 15N] sodc2 90% H2O/10% D2O 0.02 6.0 1 atm 298 13 3D HNHB 1.6 mM [U-98% 15N] sodc2 90% H2O/10% D2O 0.02 6.0 1 atm 298 14 2D CACO 1.8 mM [U-95% 13C; U-95% 15N] sodc2 90% H2O/10% D2O 0.02 6.0 1 atm 298 15 2D CBCACO 1.8 mM [U-95% 13C; U-95% 15N] sodc2 90% H2O/10% D2O 0.02 6.0 1 atm 298 16 2D CON 1.8 mM [U-95% 13C; U-95% 15N] sodc2 90% H2O/10% D2O 0.02 6.0 1 atm 298 17 2D CC-COSY 1.8 mM [U-95% 13C; U-95% 15N] sodc2 90% H2O/10% D2O 0.02 6.0 1 atm 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 900 2 Bruker AVANCE 800 3 Bruker AVANCE 700 4 Bruker AVANCE 500 5 Bruker AVANCE 700 6 Bruker AVANCE 600
NMR Refinement Method Details Software molecular dynamics CARA
NMR Ensemble Information Conformer Selection Criteria target function Conformers Calculated Total Number 200 Conformers Submitted Total Number 30 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 chemical shift assignment CARA cara_1.5.3_linux Keller and Wuthrich 2 refinement Amber 8.0 Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm 3 data analysis MOLMOL Koradi, Billeter and Wuthrich 4 data analysis ModelFree Palmer 5 processing TopSpin Bruker Biospin 6 data analysis WHAT IF Vriend