2K2O

Solution Structure of the inner DysF domain of human myoferlin


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1.3 mM [U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride90% H2O/10% D2O1006.5ambient298
22D 1H-15N HSQC1.3 mM [U-100% 13C; U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride90% H2O/10% D2O1006.5ambient298
32D 1H-15N HSQC1.3 mM [U-100% 13C; U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride100% D2O1006.5ambient298
43D 1H-15N NOESY1.3 mM [U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride90% H2O/10% D2O1006.5ambient298
53D 1H-15N TOCSY1.3 mM [U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride90% H2O/10% D2O1006.5ambient298
63D HNCA1.3 mM [U-100% 13C; U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride90% H2O/10% D2O1006.5ambient298
73D HN(CO)CA1.3 mM [U-100% 13C; U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride90% H2O/10% D2O1006.5ambient298
83D HNCACB1.3 mM [U-100% 13C; U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride90% H2O/10% D2O1006.5ambient298
93D CBCA(CO)NH1.3 mM [U-100% 13C; U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride90% H2O/10% D2O1006.5ambient298
103D HNCO1.3 mM [U-100% 13C; U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride90% H2O/10% D2O1006.5ambient298
113D HN(CA)CO1.3 mM [U-100% 13C; U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride90% H2O/10% D2O1006.5ambient298
123D HA(CA)NH1.3 mM [U-100% 13C; U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride90% H2O/10% D2O1006.5ambient298
133D HA(CACO)NH1.3 mM [U-100% 13C; U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride90% H2O/10% D2O1006.5ambient298
142D 1H-13C HSQC1.3 mM [U-100% 13C; U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride100% D2O1006.5ambient298
15aro-HSQC1.3 mM [U-100% 13C; U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride100% D2O1006.5ambient298
16aro-TOCSY-HSQC1.3 mM [U-100% 13C; U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride100% D2O1006.5ambient298
17aro-NOESY-HSQC1.3 mM [U-100% 13C; U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride100% D2O1006.5ambient298
183D HCCH-TOCSY1.3 mM [U-100% 13C; U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride100% D2O1006.5ambient298
193D 1H-13C NOESY1.3 mM [U-100% 13C; U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride100% D2O1006.5ambient298
20IPAP1.3 mM [U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride90% H2O/10% D2O1006.5ambient298
21IPAP1.3 mM [U-100% 15N] DysF, 20 mM MES, 100 mM sodium chloride90% H2O/10% D2O1006.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianUNITYPLUS500
2VarianINOVA600
3VarianINOVA800
NMR Refinement
MethodDetailsSoftware
molecular dynamicsRefinement in waterCCPN_Analysis
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentCCPN_AnalysisCCPN
2peak pickingCCPN_AnalysisCCPN
3data analysisCCPN_AnalysisCCPN
4protein dihedral angle backbone predictionTALOSCornilescu, Delaglio and Bax
5data analysisProcheckNMRLaskowski and MacArthur
6structure solutionCNSSOLVE1.2Brunger, Adams, Clore, Gros, Nilges and Read
7refinementCNSSOLVE1.2Brunger, Adams, Clore, Gros, Nilges and Read