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Structural Basis of PxxDY Motif Recognition in SH3 Binding
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D 1H-15N HSQC 0.8 mM [U-13C; U-15N] Eps8L1SH3 90% H2O/10% D2O 7.5 ambient 298 2 2D 1H-13C HSQC 0.8 mM [U-13C; U-15N] Eps8L1SH3 90% H2O/10% D2O 7.5 ambient 298 3 3D HNCA 0.8 mM [U-13C; U-15N] Eps8L1SH3 90% H2O/10% D2O 7.5 ambient 298 4 3D HN(CO)CA 0.8 mM [U-13C; U-15N] Eps8L1SH3 90% H2O/10% D2O 7.5 ambient 298 5 3D HNCACB 0.8 mM [U-13C; U-15N] Eps8L1SH3 90% H2O/10% D2O 7.5 ambient 298 6 3D CBCA(CO)NH 0.8 mM [U-13C; U-15N] Eps8L1SH3 90% H2O/10% D2O 7.5 ambient 298 7 3D iHNCACB 0.8 mM [U-13C; U-15N] Eps8L1SH3 90% H2O/10% D2O 7.5 ambient 298 8 3D iHNCA 0.8 mM [U-13C; U-15N] Eps8L1SH3 90% H2O/10% D2O 7.5 ambient 298 9 3D HCCH-COSY 0.8 mM [U-13C; U-15N] Eps8L1SH3 90% H2O/10% D2O 7.5 ambient 298 10 3D CC(CO)NH 0.8 mM [U-13C; U-15N] Eps8L1SH3 90% H2O/10% D2O 7.5 ambient 298 11 3D H(CCO)NH 0.8 mM [U-13C; U-15N] Eps8L1SH3 90% H2O/10% D2O 7.5 ambient 298 12 2D (HB)CB(CGCD)HD 0.8 mM [U-13C; U-15N] Eps8L1SH3 90% H2O/10% D2O 7.5 ambient 298 13 2D (HB)CB(CGCDCE)HE 0.8 mM [U-13C; U-15N] Eps8L1SH3 90% H2O/10% D2O 7.5 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 800 2 Varian INOVA 600
NMR Refinement Method Details Software torsion angle dynamics CYANA
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations Conformers Calculated Total Number 200 Conformers Submitted Total Number 20 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CYANA Guntert, Mumenthaler and Wuthrich 2 data analysis Sparky Goddard 3 collection VNMR Varian 4 processing VNMR Varian 5 refinement Amber Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollm 6 refinement CYANA Guntert, Mumenthaler and Wuthrich