Solution NMR Structure of the Leech Protein Saratin, a Novel Inhibitor of Haemostasis
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D_1H_NOESY | 1.4-1.7 mM Saratin | 90% H2O/10% D2O | 10 mM sodium phosphate buffer | 6.5 | ambient bar | 298 | |
| 2 | 3D_15N-separated_NOESY | 1.4-1.7 mM [U-15N] Saratin | 90% H2O/10% D2O | 10 mM sodium phosphate buffer | 6.5 | ambient bar | 298 | |
| 3 | 3D_13C-separated_NOESY | 1.4-1.7 mM [U-13C; U-15N] Saratin | 90% H2O/10% D2O | 10 mM sodium phosphate buffer | 6.5 | ambient bar | 298 | |
| 4 | 2D 1H-15N HSQC | 1.4-1.7 mM [U-15N] Saratin | 90% H2O/10% D2O | 10 mM sodium phosphate buffer | 6.5 | ambient bar | 298 | |
| 5 | 2D_1H_NOESY | 1.4-1.7 mM Saratin | 100% D2O | 10 mM sodium phosphate buffer | 6.5 | ambient bar | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DRX | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | refinement in explicit solvent (H2O) | CNS |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | 10 structure of lowest total and NOE energy |
| Conformers Calculated Total Number | 1000 |
| Conformers Submitted Total Number | 10 |
| Representative Model | 1 (lowest total and noe energy) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | CNS | Brunger A. T. et.al. | |














