2JZ2

Solution NMR structure of Ssl0352 protein from Synechocystis sp. PCC 6803. Northeast Structural Genomics Consortium target SgR42


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC1.17 mM [U-100% 13C; U-100% 15N] SgR42 protein, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM ammonium acetate, 10 mM DTT, 0.03 % sodium azide95% H2O/5% D2O1355.5ambient298
22D 1H-13C HSQC aliphatic1.17 mM [U-100% 13C; U-100% 15N] SgR42 protein, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM ammonium acetate, 10 mM DTT, 0.03 % sodium azide95% H2O/5% D2O1355.5ambient298
32D 1H-13C HSQC aromatic1.17 mM [U-100% 13C; U-100% 15N] SgR42 protein, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM ammonium acetate, 10 mM DTT, 0.03 % sodium azide95% H2O/5% D2O1355.5ambient298
42D 1H-13C CT-HSQC aliphatic1.17 mM [U-100% 13C; U-100% 15N] SgR42 protein, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM ammonium acetate, 10 mM DTT, 0.03 % sodium azide95% H2O/5% D2O1355.5ambient298
52D 1H-13C CT-HSQC aromatic1.17 mM [U-100% 13C; U-100% 15N] SgR42 protein, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM ammonium acetate, 10 mM DTT, 0.03 % sodium azide95% H2O/5% D2O1355.5ambient298
63D HNCO1.17 mM [U-100% 13C; U-100% 15N] SgR42 protein, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM ammonium acetate, 10 mM DTT, 0.03 % sodium azide95% H2O/5% D2O1355.5ambient298
7(4,3)D GFT CABCA(CO)NHN1.17 mM [U-100% 13C; U-100% 15N] SgR42 protein, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM ammonium acetate, 10 mM DTT, 0.03 % sodium azide95% H2O/5% D2O1355.5ambient298
8(4,3)D GFT HNNCABCA1.17 mM [U-100% 13C; U-100% 15N] SgR42 protein, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM ammonium acetate, 10 mM DTT, 0.03 % sodium azide95% H2O/5% D2O1355.5ambient298
9(4,3)D GFT HABCAB(CO)NHN1.17 mM [U-100% 13C; U-100% 15N] SgR42 protein, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM ammonium acetate, 10 mM DTT, 0.03 % sodium azide95% H2O/5% D2O1355.5ambient298
10(4,3)D GFT HCCH-COSY aliphatic1.17 mM [U-100% 13C; U-100% 15N] SgR42 protein, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM ammonium acetate, 10 mM DTT, 0.03 % sodium azide95% H2O/5% D2O1355.5ambient298
113D HCCH-TOCSY aliphatic1.17 mM [U-100% 13C; U-100% 15N] SgR42 protein, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM ammonium acetate, 10 mM DTT, 0.03 % sodium azide95% H2O/5% D2O1355.5ambient298
12(4,3)D GFT HCCH-COSY aromatic1.17 mM [U-100% 13C; U-100% 15N] SgR42 protein, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM ammonium acetate, 10 mM DTT, 0.03 % sodium azide95% H2O/5% D2O1355.5ambient298
133D 1H-15N,13C NOESY1.17 mM [U-100% 13C; U-100% 15N] SgR42 protein, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM ammonium acetate, 10 mM DTT, 0.03 % sodium azide95% H2O/5% D2O1355.5ambient298
142D 1H-13C CT-HSQC 28ms methyl1.17 mM [U-5% 13C; U-100% 15N] SgR42 protein, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM ammonium acetate, 10 mM DTT, 0.03 % sodium azide95% H2O/5% D2O1355.5ambient298
152D 1H-13C CT-HSQC 56ms methyl1.17 mM [U-5% 13C; U-100% 15N] SgR42 protein, 5 mM calcium chloride, 100 mM sodium chloride, 20 mM ammonium acetate, 10 mM DTT, 0.03 % sodium azide95% H2O/5% D2O1355.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA750
2VarianINOVA600
NMR Refinement
MethodDetailsSoftware
simulated annealing, simulated annealing in explicit water bathCYANA, CNSVNMRJ
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVNMRJ2.1BVarian
2processingPROSA6.0.2Guntert
3chemical shift assignmentCARA1.8.4Keller and Wuthrich
4peak pickingCARA1.8.4Keller and Wuthrich
5data analysisCSI2.0Wishart and Sykes
6data analysisTALOSCornilescu, Delaglio and Bax
7structure solutionCYANA2.1Guntert, Mumenthaler and Wuthrich
8structure solutionAutoStructure2.1.1Huang, Tejero, Powers and Montelione
9chemical shift assignmentAutoAssign1.15.1Zimmerman, Moseley, Kulikowski and Montelione
10refinementCNS1.2Brunger, Adams, Clore, Gros, Nilges and Read
11chemical shift assignmentXEASYBartels et al.
12data analysisXEASYBartels et al.