2JVV

Solution Structure of E. coli NusG carboxyterminal domain


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.45 mM [U-95% 13C; U-95% 15N] NusG, 10 mM potassium phosphate, 50 mM sodium chloride90% H2O/10% D2O6.4ambient298
22D 1H-13C HSQC0.45 mM [U-95% 13C; U-95% 15N] NusG, 10 mM potassium phosphate, 50 mM sodium chloride90% H2O/10% D2O6.4ambient298
33D HNCO0.45 mM [U-95% 13C; U-95% 15N] NusG, 10 mM potassium phosphate, 50 mM sodium chloride90% H2O/10% D2O6.4ambient298
43D HNCA0.45 mM [U-95% 13C; U-95% 15N] NusG, 10 mM potassium phosphate, 50 mM sodium chloride90% H2O/10% D2O6.4ambient298
53D CBCA(CO)NH0.45 mM [U-95% 13C; U-95% 15N] NusG, 10 mM potassium phosphate, 50 mM sodium chloride90% H2O/10% D2O6.4ambient298
63D HNCACB0.45 mM [U-95% 13C; U-95% 15N] NusG, 10 mM potassium phosphate, 50 mM sodium chloride90% H2O/10% D2O6.4ambient298
73D HBHA(CO)NH0.45 mM [U-95% 13C; U-95% 15N] NusG, 10 mM potassium phosphate, 50 mM sodium chloride90% H2O/10% D2O6.4ambient298
83D HCCH-TOCSY0.45 mM [U-95% 13C; U-95% 15N] NusG, 10 mM potassium phosphate, 50 mM sodium chloride90% H2O/10% D2O6.4ambient298
93D 1H-15N NOESY0.45 mM [U-95% 13C; U-95% 15N] NusG, 10 mM potassium phosphate, 50 mM sodium chloride90% H2O/10% D2O6.4ambient298
103D 1H-13C NOESY0.45 mM [U-95% 13C; U-95% 15N] NusG, 10 mM potassium phosphate, 50 mM sodium chloride90% H2O/10% D2O6.4ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAvance800
2BrukerAvance900
NMR Refinement
MethodDetailsSoftware
simulated annealingNMRView
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number120
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsThe protein shows aggregation via the aminoterminal domain, and the resulting line broading of the signals of the aminoterminal domain did not allow a structure determination of the aminoterminal domain using the full length protein. Becuase of flexible linked domains the carboxyterminal domain showed sufficient signals to determine the structure of this domain using the full length protein. Only the carboxyterminal domain (res. 124-181) gave interpretable NMR data for assignment and structure determination.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentNMRViewJohnson, One Moon Scientific
2structure solutionX-PLOR_NIH1.2.1Schwieters, Kuszewski, Tjandra and Clore
3refinementX-PLOR_NIH1.2.1Schwieters, Kuszewski, Tjandra and Clore