2JTR | pdb_00002jtr

rhodanese persulfide from E. coli

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	3D 1H-15N NOESY	1 mM [U-13C; U-15N] rhodanese persulfide, 20 mM sodium thiosulfate, 20 mM TRIS	90% H2O/10% D2O	0.04	7.2	ambient	298
2	3D 1H-13C NOESY	1 mM [U-13C; U-15N] rhodanese persulfide, 20 mM sodium thiosulfate, 20 mM TRIS	90% H2O/10% D2O	0.04	7.2	ambient	298
3	2D 1H-15N HSQC	1 mM [U-13C; U-15N] rhodanese persulfide, 20 mM sodium thiosulfate, 20 mM TRIS	90% H2O/10% D2O	0.04	7.2	ambient	298
4	3D CBCA(CO)NH	1 mM [U-13C; U-15N] rhodanese persulfide, 20 mM sodium thiosulfate, 20 mM TRIS	90% H2O/10% D2O	0.04	7.2	ambient	298
5	3D C(CO)NH	1 mM [U-13C; U-15N] rhodanese persulfide, 20 mM sodium thiosulfate, 20 mM TRIS	90% H2O/10% D2O	0.04	7.2	ambient	298
6	3D HNCO	1 mM [U-13C; U-15N] rhodanese persulfide, 20 mM sodium thiosulfate, 20 mM TRIS	90% H2O/10% D2O	0.04	7.2	ambient	298
7	3D HNCA	1 mM [U-13C; U-15N] rhodanese persulfide, 20 mM sodium thiosulfate, 20 mM TRIS	90% H2O/10% D2O	0.04	7.2	ambient	298
8	3D HNCACB	1 mM [U-13C; U-15N] rhodanese persulfide, 20 mM sodium thiosulfate, 20 mM TRIS	90% H2O/10% D2O	0.04	7.2	ambient	298
9	3D HBHA(CO)NH	1 mM [U-13C; U-15N] rhodanese persulfide, 20 mM sodium thiosulfate, 20 mM TRIS	90% H2O/10% D2O	0.04	7.2	ambient	298
10	3D HN(CO)CA	1 mM [U-13C; U-15N] rhodanese persulfide, 20 mM sodium thiosulfate, 20 mM TRIS	90% H2O/10% D2O	0.04	7.2	ambient	298
11	3D H(CCO)NH	1 mM [U-13C; U-15N] rhodanese persulfide, 20 mM sodium thiosulfate, 20 mM TRIS	90% H2O/10% D2O	0.04	7.2	ambient	298
12	3D HCCH-TOCSY	1 mM [U-13C; U-15N] rhodanese persulfide, 20 mM sodium thiosulfate, 20 mM TRIS	90% H2O/10% D2O	0.04	7.2	ambient	298
13	3D 1H-15N TOCSY	1 mM [U-13C; U-15N] rhodanese persulfide, 20 mM sodium thiosulfate, 20 mM TRIS	90% H2O/10% D2O	0.04	7.2	ambient	298
14	3D HCCH-COSY	1 mM [U-13C; U-15N] rhodanese persulfide, 20 mM sodium thiosulfate, 20 mM TRIS	90% H2O/10% D2O	0.04	7.2	ambient	298
15	3D HCACO	1 mM [U-13C; U-15N] rhodanese persulfide, 20 mM sodium thiosulfate, 20 mM TRIS	90% H2O/10% D2O	0.04	7.2	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE	800
2	Bruker	AVANCE	600
3	Bruker	AVANCE	500

NMR Refinement
Method	Details	Software
simulated annealing, molecular dynamics		Amber

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	100
Conformers Submitted Total Number	21
Representative Model	1 (minimized average structure)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	Amber	7	Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, et.al.
2	initial structure calculation	CYANA		Guntert, Mumenthaler and Wuthrich
3	structure calculation	DYANA		Guntert, Braun and Wuthrich
4	geometry optimization	MOLMOL		Koradi, Billeter and Wuthrich
5	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
6	processing	NMRView		Johnson, One Moon Scientific
7	chemical shift calculation	SANE		Duggan, Legge, Dyson & Wright
8	angle restraints	TALOS		Cornilescu, Delaglio and Bax
9	processing	NMRDraw		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax