2JP5

ATWLPPR an anti-angiogenic peptide


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
11D 1H spectrum1 mM ATWLPPR [13C, 15N], 10 mM phosphate (the mixture of Na2HPO4 and NaH2PO4 that gave a pH of 7.0), 140 mM NaCl, 5 micromolar EDTA, 2 micromolar NaN3100% D2O0.1407.0ambient298
22D 1H-13C HSQC1 mM ATWLPPR [13C, 15N], 10 mM phosphate (the mixture of Na2HPO4 and NaH2PO4 that gave a pH of 7.0), 140 mM NaCl, 5 micromolar EDTA, 2 micromolar NaN3100% D2O0.1407.0ambient298
32D DQF-COSY1 mM ATWLPPR [13C, 15N], 10 mM phosphate (the mixture of Na2HPO4 and NaH2PO4 that gave a pH of 7.0), 140 mM NaCl, 5 micromolar EDTA, 2 micromolar NaN3100% D2O0.1407.0ambient298
42D 1H-1H NOESY1 mM ATWLPPR [13C, 15N], 10 mM phosphate (the mixture of Na2HPO4 and NaH2PO4 that gave a pH of 7.0), 140 mM NaCl, 5 micromolar EDTA, 2 micromolar NaN3100% D2O0.1407.0ambient298
51D 1H spectrum1 mM ATWLPPR [13C, 15N], 10 mM phosphate (the mixture of Na2HPO4 and NaH2PO4 that gave a pH of 7.0), 140 mM NaCl, 5 micromolar EDTA, 2 micromolar NaN390% H2O/10% D2O0.1407.0ambient298
62D 1H-1H NOESY1 mM ATWLPPR [13C, 15N], 10 mM phosphate (the mixture of Na2HPO4 and NaH2PO4 that gave a pH of 7.0), 140 mM NaCl, 5 micromolar EDTA, 2 micromolar NaN390% H2O/10% D2O0.1407.0ambient298
72D 1H-1H COSY1 mM ATWLPPR [13C, 15N], 10 mM phosphate (the mixture of Na2HPO4 and NaH2PO4 that gave a pH of 7.0), 140 mM NaCl, 5 micromolar EDTA, 2 micromolar NaN390% H2O/10% D2O0.1407.0ambient298
81D 1H spectrum1 mM ATWLPPR [13C, 15N], 10 mM phosphate (the mixture of Na2HPO4 and NaH2PO4 that gave a pH of 7.0), 140 mM NaCl, 5 micromolar EDTA, 2 micromolar NaN390% H2O/10% D2O0.1407.0ambient278
92D 1H-1H NOESY1 mM ATWLPPR [13C, 15N], 10 mM phosphate (the mixture of Na2HPO4 and NaH2PO4 that gave a pH of 7.0), 140 mM NaCl, 5 micromolar EDTA, 2 micromolar NaN390% H2O/10% D2O0.1407.0ambient278
103D 1H-15N TOCSY1 mM ATWLPPR [13C, 15N], 10 mM phosphate (the mixture of Na2HPO4 and NaH2PO4 that gave a pH of 7.0), 140 mM NaCl, 5 micromolar EDTA, 2 micromolar NaN390% H2O/10% D2O0.1407.0ambient278
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianUNITYPLUS500
NMR Refinement
MethodDetailsSoftware
simulated annealingPROSA
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (fewest violations)
Additional NMR Experimental Information
DetailsNMR chemical shift list at 25 degrees C is given but the restraints were established at 5 degrees C due to a more favorable overall tumbling at lower temperature
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1data analysisPROSAGuntert
2peak pickingXEASY1.3Bartels et al.
3structure solutionDYANA1.5Guntert, Braun and Wuthrich
4refinementDYANA1.5Guntert, Braun and Wuthrich