X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
180.1 M TRIS/HCL PH 8.0 0.2 M MGCL2 2.0 M NACL
Crystal Properties
Matthews coefficientSolvent content
2.1542.45

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 91.52α = 90
b = 91.52β = 90
c = 297γ = 120
Symmetry
Space GroupP 61 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2003-11-30MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-3ESRFID14-3

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.535990.04457.9263772
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.52.56990.169.85.3

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT2.528.9623677258899.20.2180.2110.283RANDOM51.17
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.13-0.06-0.130.19
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.458
r_dihedral_angle_3_deg15.342
r_dihedral_angle_4_deg11.481
r_dihedral_angle_1_deg4.687
r_mcangle_it1.214
r_angle_refined_deg1.046
r_mcbond_it1.039
r_scangle_it0.953
r_angle_other_deg0.719
r_scbond_it0.663
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg34.458
r_dihedral_angle_3_deg15.342
r_dihedral_angle_4_deg11.481
r_dihedral_angle_1_deg4.687
r_mcangle_it1.214
r_angle_refined_deg1.046
r_mcbond_it1.039
r_scangle_it0.953
r_angle_other_deg0.719
r_scbond_it0.663
r_xyhbond_nbd_refined0.284
r_symmetry_vdw_other0.257
r_symmetry_hbond_refined0.247
r_symmetry_vdw_refined0.231
r_nbd_refined0.223
r_nbtor_refined0.201
r_nbd_other0.195
r_nbtor_other0.091
r_chiral_restr0.058
r_bond_refined_d0.01
r_gen_planes_refined0.004
r_bond_other_d0.002
r_gen_planes_other0.001
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_mcangle_other
r_scbond_other
r_scangle_other
r_long_range_B_refined
r_long_range_B_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms5658
Nucleic Acid Atoms
Solvent Atoms295
Heterogen Atoms

Software

Software
Software NamePurpose
HKL-2000data reduction
HKL-2000data scaling
SHARPphasing
SOLOMONphasing
REFMACrefinement