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CRYSTAL STRUCTURE OF DITHIONITE-REDUCED AROMATIC AMINE DEHYDROGENASE (AADH) FROM ALCALIGENES FAECALIS IN COMPLEX WITH TRYPTAMINE
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 6 292 PEG 2000 MME, AMMONIUM SULPHATE, SODIUM CACODYLATE, PH 6.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K
Crystal Properties Matthews coefficient Solvent content 2.5 41
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 71.139 α = 90 b = 89.028 β = 90.1 c = 80.727 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ESRF BEAMLINE ID14-1 ESRF ID14-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.5 30 91 0.08 13.2 3.3 138957
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.5 1.56 88 0.42 3.4 2.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT 1.5 15 138957 7357 91.2 0.158 0.157 0.1671 0.19 0.1994 RANDOM 14.83
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.47 -0.58 -0.02 0.48
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.102 r_dihedral_angle_4_deg 13.195 r_dihedral_angle_3_deg 11.399 r_dihedral_angle_1_deg 7.522 r_scangle_it 4.874 r_scbond_it 3.946 r_mcangle_it 2.535 r_mcbond_it 2.229 r_angle_refined_deg 1.091 r_angle_other_deg 0.695
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 36.102 r_dihedral_angle_4_deg 13.195 r_dihedral_angle_3_deg 11.399 r_dihedral_angle_1_deg 7.522 r_scangle_it 4.874 r_scbond_it 3.946 r_mcangle_it 2.535 r_mcbond_it 2.229 r_angle_refined_deg 1.091 r_angle_other_deg 0.695 r_symmetry_vdw_other 0.243 r_symmetry_hbond_refined 0.236 r_nbd_refined 0.209 r_nbd_other 0.204 r_symmetry_vdw_refined 0.169 r_xyhbond_nbd_refined 0.138 r_nbtor_other 0.097 r_chiral_restr 0.082 r_bond_refined_d 0.012 r_gen_planes_refined 0.007 r_bond_other_d 0.002 r_gen_planes_other 0.001 r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7332 Nucleic Acid Atoms Solvent Atoms 1308 Heterogen Atoms 24
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling