Solution Conformation of the H47A Mutant of Pseudomonas stutzeri ZoBell Ferrocytochrome c-551
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D TOCSY | 1.5 mM H47A c-551, 50 mM sodium phosphate buffer, 90% H2O, 10% D2O | 90% H2O/10% D2O | 50 mM | 7.0 | ambient | 298 | |
| 2 | 2D NOESY | 1.5 mM H47A c-551, 50 mM sodium phosphate buffer, 90% H2O, 10% D2O | 90% H2O/10% D2O | 50 mM | 7.0 | ambient | 298 | |
| 3 | DQF-COSY | 1.5 mM H47A c-551, 50 mM sodium phosphate buffer, 90% H2O, 10% D2O | 90% H2O/10% D2O | 50 mM | 7.0 | ambient | 298 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing | The structures are based on a total of 1511 restraints, 1414 are NOE-derived distance constraints, 67 dihedral angle restraints, 30 distance restraints from hydrogen bonds. | ARIA |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | |
| Conformers Calculated Total Number | |
| Conformers Submitted Total Number | 1 |
| Representative Model | 1 (minimized average structure) |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | refinement | ARIA | 2.0 alpha | M.NILGES, S. I. O'DONOGHUE |
| 2 | refinement | CNS | 1.1 | A. Brunger, P. D. Adams, G. M. Clore, W. L. Delano, P. Gros, R. W. Gross-Kunstleve, J. S. Jiang, J. Kuszewski, M. Nilges, N. S. Pannu, R. J. Read, L. M. Rice, T. Simonson, G. L. Warren |
| 3 | processing | NMRPipe | July, 2004 | F. Delaglio, S. Grzesiek, G.W. Vuister, G. Zhu, J. Pfeifer, A. Bax |
| 4 | collection | TopSpin | 1.3 | Bruker |
| 5 | data analysis | NMRView | 6.2.10 | B. A. Johnson, R. A. Belvins |
