2I7E

GAAA tetralooop receptor complex with associated cobalt hexammine.


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY1 mM GAAA tetraloop receptor RNA, 10 mM MgCl2, 2 mM cobalt hexaamine, 50 mM NaCl, pH 7.0; 90% H2O 10 %D2O90% H2O/10% D2O7.0ambient283
22D HMQC1 mM GAAA tetraloop receptor RNA, 10 mM MgCl2, 2 mM cobalt hexaamine, 50 mM NaCl, pH 7.0; 90% H2O 10 %D2O90% H2O/10% D2O7.0ambient283
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDMX750
2VarianINOVA900
3BrukerDMX600
NMR Refinement
MethodDetailsSoftware
structures were subjected to 60 ps (15 fs time steps) of restrained molecular dynamics in torsion angle space, followed by 90 ps of slow cooling. Finally 30 ps (5 fs time steps) of restrained molecular dynamics in Cartesian coordinate space were performedCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementCNS1.0Brunger A. T. etall
2refinementX-PLOR2.11
3processingXwinNMR2.6
4data analysisSparky3.111