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Dimeric solution structure of the cyclic octamer d(CCGTCCGT)
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 5mM oligonucleotide concentration, 100mM NaCl buffer, 90% H2O, 10% D2O 90% H2O/10% D2O 100 mM NaCl 7 1 atm 289 2 DQF-COSY 5mM oligonucleotide concentration, 100mM NaCl buffer, 90% H2O, 10% D2O 90% H2O/10% D2O 100 mM NaCl 7 1 atm 289
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker AVANCE 600 2 Bruker AVANCE 800
NMR Refinement Method Details Software relaxation matrix calculation
restrained molecular dynamics MARDIGRAS
NMR Ensemble Information Conformer Selection Criteria all calculated structures submitted Conformers Calculated Total Number 10 Conformers Submitted Total Number 10 Representative Model 1 (fewest violations)
Computation: NMR Software # Classification Version Software Name Author 1 iterative matrix relaxation MARDIGRAS 1.5 T.L. James 2 refinement Amber 7.0 Kollman et al