2G4R

anomalous substructure of MogA


X-RAY DIFFRACTION

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 31.59α = 90
b = 97.84β = 105.02
c = 57.71γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2005-01-01MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE X122.00EMBL/DESY, HAMBURGX12

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.923025758

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONFOURIER SYNTHESISTHROUGHOUT1.92302527548399.570.180040.178780.24139RANDOM34.702
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.280.340.5-0.6
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.656
r_dihedral_angle_4_deg19.136
r_dihedral_angle_3_deg15.392
r_dihedral_angle_1_deg9.056
r_scangle_it6.352
r_scbond_it4.575
r_mcangle_it1.998
r_angle_refined_deg1.76
r_mcbond_it1.528
r_angle_other_deg0.939
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg33.656
r_dihedral_angle_4_deg19.136
r_dihedral_angle_3_deg15.392
r_dihedral_angle_1_deg9.056
r_scangle_it6.352
r_scbond_it4.575
r_mcangle_it1.998
r_angle_refined_deg1.76
r_mcbond_it1.528
r_angle_other_deg0.939
r_symmetry_vdw_other0.279
r_mcbond_other0.263
r_nbd_refined0.222
r_symmetry_vdw_refined0.209
r_nbd_other0.192
r_nbtor_refined0.171
r_symmetry_hbond_refined0.169
r_xyhbond_nbd_refined0.166
r_chiral_restr0.108
r_nbtor_other0.086
r_xyhbond_nbd_other0.059
r_bond_refined_d0.019
r_gen_planes_refined0.007
r_bond_other_d0.002
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3156
Nucleic Acid Atoms
Solvent Atoms151
Heterogen Atoms9

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
CCP4data scaling
FFTphasing