X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION7.52920.2M K/Na tartrate tetrahydrate, 20% PEG 3350, pH 7.5, VAPOR DIFFUSION, temperature 292K
Crystal Properties
Matthews coefficientSolvent content
2.7655.47

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 52.272α = 90
b = 79.909β = 100.18
c = 131.239γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDCUSTOM-MADE2003-06-05MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-ID0.97887, 0.97943APS19-ID

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.45099.44144841448
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.42.591.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT2.4503935239352209599.210.209450.209450.20810.23392RANDOM64.709
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-1.750.993.13-1.03
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg41.376
r_dihedral_angle_3_deg19.281
r_dihedral_angle_4_deg19.205
r_dihedral_angle_1_deg5.742
r_scangle_it3.907
r_scbond_it2.631
r_mcangle_it1.6
r_angle_refined_deg1.5
r_mcbond_it1.405
r_nbtor_refined0.304
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg41.376
r_dihedral_angle_3_deg19.281
r_dihedral_angle_4_deg19.205
r_dihedral_angle_1_deg5.742
r_scangle_it3.907
r_scbond_it2.631
r_mcangle_it1.6
r_angle_refined_deg1.5
r_mcbond_it1.405
r_nbtor_refined0.304
r_symmetry_vdw_refined0.275
r_nbd_refined0.221
r_xyhbond_nbd_refined0.175
r_symmetry_hbond_refined0.136
r_chiral_restr0.106
r_bond_refined_d0.016
r_gen_planes_refined0.006
r_bond_other_d
r_angle_other_deg
r_gen_planes_other
r_nbd_other
r_nbtor_other
r_xyhbond_nbd_other
r_metal_ion_refined
r_metal_ion_other
r_symmetry_vdw_other
r_symmetry_hbond_other
r_symmetry_metal_ion_refined
r_symmetry_metal_ion_other
r_mcbond_other
r_rigid_bond_restr
r_sphericity_free
r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms5443
Nucleic Acid Atoms
Solvent Atoms177
Heterogen Atoms117

Software

Software
Software NamePurpose
REFMACrefinement
d*TREKdata reduction
HKL-2000data scaling
CNSphasing
autoSHARPphasing