2FUP

Crystal structure of a putative flagella synthesis protein flgn (pa3352) from pseudomonas aeruginosa at 1.48 A resolution


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP, NANODROP427720.0% MPD, 0.1M Citrate, pH 4.0, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
2.2496545.324837

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 62.531α = 90
b = 62.531β = 90
c = 80.241γ = 90
Symmetry
Space GroupP 43 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 3152005-12-15MMAD
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 8.2.20.9797, 0.9999, 0.9795ALS8.2.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.4829.741000.0810.0815.86.827261
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.481.561000.7640.76415.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMADTHROUGHOUT1.4829.7127190136199.940.190.1880.218RANDOM22.417
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.51-0.511.01
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.347
r_dihedral_angle_4_deg16.991
r_dihedral_angle_3_deg11.36
r_scangle_it8.118
r_scbond_it5.352
r_dihedral_angle_1_deg4.246
r_mcangle_it3.115
r_mcbond_it2.458
r_angle_refined_deg1.713
r_angle_other_deg0.923
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.347
r_dihedral_angle_4_deg16.991
r_dihedral_angle_3_deg11.36
r_scangle_it8.118
r_scbond_it5.352
r_dihedral_angle_1_deg4.246
r_mcangle_it3.115
r_mcbond_it2.458
r_angle_refined_deg1.713
r_angle_other_deg0.923
r_mcbond_other0.552
r_symmetry_vdw_other0.257
r_symmetry_vdw_refined0.256
r_nbd_refined0.247
r_symmetry_hbond_refined0.24
r_nbd_other0.187
r_nbtor_refined0.178
r_xyhbond_nbd_refined0.175
r_chiral_restr0.099
r_nbtor_other0.084
r_bond_refined_d0.018
r_gen_planes_refined0.008
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms974
Nucleic Acid Atoms
Solvent Atoms110
Heterogen Atoms8

Software

Software
Software NamePurpose
REFMACrefinement
SCALAdata scaling
PDB_EXTRACTdata extraction
MOSFLMdata reduction
CCP4data scaling
SHARPphasing