X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1micro batch under oil4.5277PEG 8000, pH 4.5, micro batch under oil, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
2.6653.77

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 85.107α = 90
b = 90.526β = 90
c = 156.584γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2004-05-21MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONMAX II BEAMLINE I7111.095MAX III711

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.875098.42788027880
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
2.872.9485.3

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.8727.0727832142998.350.2030.2030.20.262RANDOM29.465
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.050.030.03
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.886
r_dihedral_angle_3_deg18.08
r_dihedral_angle_4_deg14.856
r_dihedral_angle_1_deg5.429
r_scangle_it1.712
r_angle_refined_deg1.093
r_scbond_it1.003
r_mcangle_it0.893
r_mcbond_it0.49
r_nbtor_refined0.306
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.886
r_dihedral_angle_3_deg18.08
r_dihedral_angle_4_deg14.856
r_dihedral_angle_1_deg5.429
r_scangle_it1.712
r_angle_refined_deg1.093
r_scbond_it1.003
r_mcangle_it0.893
r_mcbond_it0.49
r_nbtor_refined0.306
r_metal_ion_refined0.256
r_nbd_refined0.206
r_symmetry_vdw_refined0.193
r_symmetry_hbond_refined0.177
r_xyhbond_nbd_refined0.139
r_chiral_restr0.069
r_bond_refined_d0.008
r_gen_planes_refined0.003
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms7495
Nucleic Acid Atoms
Solvent Atoms215
Heterogen Atoms9

Software

Software
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction
MOSFLMdata reduction
CCP4data scaling
AMoREphasing