X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1micro batch under oil4.5277PEG 8000, pH 4.5, micro batch under oil, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
2.754.38

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 85.286α = 90
b = 90.929β = 90
c = 157.618γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDMARRESEARCH2004-06-11MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONMAX II BEAMLINE I7110.950MAX III711

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.55099.74284342843
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
2.52.5699.5

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.519.924067840678216599.510.2060.2060.2040.255RANDOM37.149
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.010.03-0.02
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg5.887
r_scangle_it2.747
r_scbond_it1.531
r_angle_refined_deg1.259
r_mcangle_it1.23
r_angle_other_deg0.796
r_mcbond_it0.642
r_symmetry_vdw_other0.308
r_symmetry_hbond_refined0.306
r_nbd_other0.23
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_1_deg5.887
r_scangle_it2.747
r_scbond_it1.531
r_angle_refined_deg1.259
r_mcangle_it1.23
r_angle_other_deg0.796
r_mcbond_it0.642
r_symmetry_vdw_other0.308
r_symmetry_hbond_refined0.306
r_nbd_other0.23
r_nbd_refined0.193
r_xyhbond_nbd_refined0.181
r_symmetry_vdw_refined0.173
r_metal_ion_refined0.112
r_nbtor_other0.084
r_chiral_restr0.077
r_bond_refined_d0.012
r_gen_planes_refined0.004
r_bond_other_d0.002
r_gen_planes_other0.002
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms7495
Nucleic Acid Atoms
Solvent Atoms332
Heterogen Atoms8

Software

Software
Software NamePurpose
REFMACrefinement
PDB_EXTRACTdata extraction
MOSFLMdata reduction
CCP4data scaling
AMoREphasing