X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1EVAPORATION5.52980.1M Sodium Cacodylate, 11.5% Isopropanol, pH 5.5, EVAPORATION, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.453.66

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 48.054α = 90
b = 47.51β = 90
c = 94.807γ = 90
Symmetry
Space GroupI 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 42005-01-09MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 5.0.20.979259ALS5.0.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.35072.40.0660.06643.210.648002.553
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.394.70.0660.53143.210.6326

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT2.319.443722331000.226340.226340.224440.26481RANDOM65.993
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.24-0.11-0.13
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.118
r_dihedral_angle_3_deg19.636
r_dihedral_angle_4_deg18.272
r_dihedral_angle_1_deg8.947
r_angle_refined_deg2.139
r_scangle_it1.854
r_mcangle_it1.254
r_scbond_it1.109
r_mcbond_it0.739
r_symmetry_hbond_refined0.357
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.118
r_dihedral_angle_3_deg19.636
r_dihedral_angle_4_deg18.272
r_dihedral_angle_1_deg8.947
r_angle_refined_deg2.139
r_scangle_it1.854
r_mcangle_it1.254
r_scbond_it1.109
r_mcbond_it0.739
r_symmetry_hbond_refined0.357
r_nbtor_refined0.307
r_nbd_refined0.274
r_symmetry_vdw_refined0.203
r_chiral_restr0.144
r_xyhbond_nbd_refined0.108
r_bond_refined_d0.011
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms637
Nucleic Acid Atoms
Solvent Atoms14
Heterogen Atoms

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling
SOLVEphasing