2FEE

Structure of the Cl-/H+ exchanger CLC-ec1 from E.Coli in NaBr


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP7.5298100 mM NaBr, PEG 400 37% , 0.05 M Hepes, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
3.7367.05

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 230.822α = 90
b = 97.684β = 131.11
c = 170.202γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 4MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 8.2.10.9198ALS8.2.1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
13.2128.04990.0710.07119.1439552
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
3.23.398.40.5230.5232.3

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1OTS3.2128.04343955234197.80.2540.253570.251440.29257RANDOM119.602
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-2.932.423.372.74
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.097
r_dihedral_angle_4_deg20.449
r_dihedral_angle_3_deg20.412
r_dihedral_angle_1_deg6.396
r_angle_refined_deg1.466
r_nbtor_refined0.319
r_nbd_refined0.249
r_symmetry_vdw_refined0.165
r_xyhbond_nbd_refined0.163
r_chiral_restr0.093
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg35.097
r_dihedral_angle_4_deg20.449
r_dihedral_angle_3_deg20.412
r_dihedral_angle_1_deg6.396
r_angle_refined_deg1.466
r_nbtor_refined0.319
r_nbd_refined0.249
r_symmetry_vdw_refined0.165
r_xyhbond_nbd_refined0.163
r_chiral_restr0.093
r_symmetry_hbond_refined0.029
r_bond_refined_d0.013
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms13223
Nucleic Acid Atoms
Solvent Atoms
Heterogen Atoms

Software

Software
Software NamePurpose
MOSFLMdata reduction
SCALAdata scaling
PHASERphasing
REFMACrefinement
CCP4data scaling