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NMR structure of SMP-1 (Small Myristoylated Protein) from Leishmania major
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_13C-separated_NOESY 1mM SMP-1 U-15N, 13C; 50mM phosphate; 5mM DTT; 90% H2O, 10% D2O 90% H2O/10% D2O 50mM 6.8 ambient 298 2 3D_15N-separated_NOESY 1mM SMP-1 U-15N; 50mM phosphate; 5mM DTT; 90% H2O, 10% D2O 90% H2O/10% D2O 50mM 6.9 ambient 298 3 HNHA 1mM SMP-1 U-15N; 50mM phosphate; 5mM DTT; 90% H2O, 10% D2O 90% H2O/10% D2O 50mM 6.9 ambient 298 4 HNHB 1mM SMP-1 U-15N; 50mM phosphate; 5mM DTT; 90% H2O, 10% D2O 90% H2O/10% D2O 50mM 6.9 ambient 298 5 HACACB 1mM SMP-1 U-15N, 13C; 50mM phosphate; 5mM DTT; 100% D2O 100% D2O 50mM 6.8 ambient 298 6 3D_13C-separated_NOESY 1mM SMP-1 U-15N, 13C; 50mM phosphate; 5mM DTT; 100% D2O 100% D2O 50mM 6.8 ambient 298 7 13C'-{13Cg} spin-echo difference 15N HSQC 1mM SMP-1 U-15N, 13C; 50mM phosphate; 5mM DTT; 90% H2O, 10% D2O 90% H2O/10% D2O 50mM 6.8 ambient 298 8 15N-{13Cg} spin-echo difference 15N HSQC 1mM SMP-1 U-15N, 13C; 50mM phosphate; 5mM DTT; 90% H2O, 10% D2O 90% H2O/10% D2O 50mM 6.8 ambient 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600 2 Varian INOVA 500
NMR Refinement Method Details Software torsion angle dynamics 1671 NOE-derived distance constriants, 82 dihedral angle constraints CYANA-CANDID
NMR Ensemble Information Conformer Selection Criteria the smallest constraint violations, most favourable non-bond energies Conformers Calculated Total Number 100 Conformers Submitted Total Number 24 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution CYANA-CANDID 1.0.7 T. Hermann, P. Guntert, K. Wuthrich 2 refinement XPLOR-NIH 2.11 C.D. Schweiters, J. Kuszewski, N. Tjandra, G.M. Clore 3 processing NMRPipe 2.3 F. Delaglio 4 data analysis NMRView 5.2.2 B.A. Johnson