2FBZ

Heme-No complex in a bacterial Nitric Oxide Synthase


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION6.52985-10% PEG8K, NOC-12, Potassium Acetate, pH 6.5, VAPOR DIFFUSION, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.7955.87

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 79.995α = 90
b = 93.503β = 90
c = 62.769γ = 90
Symmetry
Space GroupP 21 21 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATERIGAKU2004-07-21MSINGLE WAVELENGTH
21
31
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X250.93NSLSX25
2SYNCHROTRONCHESS BEAMLINE F10.92CHESSF1
3SYNCHROTRONCHESS BEAMLINE F10.92CHESSF1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.93099360053559511
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.993.1

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT2.1202509512751000.232350.231440.2503RANDOM34.754
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-2.67-1.394.06
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.471
r_dihedral_angle_4_deg18.969
r_dihedral_angle_3_deg12.515
r_scangle_it6.132
r_scbond_it4.152
r_mcangle_it2.655
r_angle_refined_deg2.136
r_mcbond_it1.812
r_dihedral_angle_1_deg1.542
r_symmetry_hbond_refined0.706
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg37.471
r_dihedral_angle_4_deg18.969
r_dihedral_angle_3_deg12.515
r_scangle_it6.132
r_scbond_it4.152
r_mcangle_it2.655
r_angle_refined_deg2.136
r_mcbond_it1.812
r_dihedral_angle_1_deg1.542
r_symmetry_hbond_refined0.706
r_symmetry_vdw_refined0.508
r_nbtor_refined0.317
r_nbd_refined0.294
r_xyhbond_nbd_refined0.243
r_chiral_restr0.184
r_metal_ion_refined0.129
r_bond_refined_d0.02
r_gen_planes_refined0.013
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2933
Nucleic Acid Atoms
Solvent Atoms298
Heterogen Atoms75

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling
CNSphasing