2EWH

Carboxysome protein CsoS1A from Halothiobacillus neapolitanus


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP9.529330% PEG 400, 0.1M 2(cyclohexylamino)ethanosulfonic acid, pH 9.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
1.8533.5

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 66.417α = 90
b = 66.417β = 90
c = 28.982γ = 120
Symmetry
Space GroupP 6

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 3152005-10-21MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONALS BEAMLINE 8.2.21.00000ALS8.2.2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.49094.10.0728.8136851368524.3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.41.4571.80.3955.21025

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 2A101.457.54123391233962584.860.1870.1870.1850.24RANDOM28.4
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-2.58-1.29-2.583.87
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg27.458
r_dihedral_angle_4_deg21.622
r_dihedral_angle_3_deg12.471
r_dihedral_angle_1_deg6.452
r_scangle_it5.229
r_mcangle_it3.444
r_scbond_it3.372
r_mcbond_it2.584
r_angle_refined_deg1.691
r_nbtor_refined0.298
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg27.458
r_dihedral_angle_4_deg21.622
r_dihedral_angle_3_deg12.471
r_dihedral_angle_1_deg6.452
r_scangle_it5.229
r_mcangle_it3.444
r_scbond_it3.372
r_mcbond_it2.584
r_angle_refined_deg1.691
r_nbtor_refined0.298
r_nbd_refined0.221
r_symmetry_vdw_refined0.215
r_symmetry_hbond_refined0.151
r_xyhbond_nbd_refined0.137
r_chiral_restr0.123
r_bond_refined_d0.017
r_gen_planes_refined0.007
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms657
Nucleic Acid Atoms
Solvent Atoms52
Heterogen Atoms12

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
PHASERphasing
REFMACrefinement
PDB_EXTRACTdata extraction
BOSdata collection